Protein–RNA interactions for Protein: P36941

LTBR, Tumor necrosis factor receptor superfamily member 3, humanhuman

Predictions only

Length 435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LTBRP36941 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 WASH7P-201ENST00000488147 1351 ntBASIC14.84□□□□□ -0.03
LTBRP36941 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
LTBRP36941 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC14.84□□□□□ -0.03
LTBRP36941 ADHFE1-203ENST00000396623 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
LTBRP36941 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTBRP36941 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LTBRP36941 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
LTBRP36941 OXA1L-202ENST00000358043 1750 ntTSL 2 BASIC14.83□□□□□ -0.03
LTBRP36941 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.03
LTBRP36941 CPXM1-201ENST00000380605 2391 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
LTBRP36941 PPP1R21-206ENST00000449090 3049 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 C7orf57-201ENST00000348904 2125 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 OPN1MW2-201ENST00000369929 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBRP36941 FAM21EP-201ENST00000417804 985 ntBASIC14.83□□□□□ -0.04
LTBRP36941 HORMAD2-AS1-202ENST00000432568 727 ntTSL 3 BASIC14.83□□□□□ -0.04
LTBRP36941 C21orf62-204ENST00000490358 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC14.83□□□□□ -0.04
LTBRP36941 BID-209ENST00000551952 700 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 HNRNPA1P16-201ENST00000575692 955 ntBASIC14.83□□□□□ -0.04
LTBRP36941 RN7SL556P-201ENST00000582856 298 ntBASIC14.83□□□□□ -0.04
LTBRP36941 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 PFDN5-220ENST00000628881 231 ntTSL 3 BASIC14.83□□□□□ -0.04
LTBRP36941 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBRP36941 CCT4-204ENST00000544079 2261 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 MLF1-217ENST00000619577 2290 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBRP36941 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 GSN-206ENST00000394353 2311 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 PDE2A-226ENST00000544570 3119 ntTSL 5 BASIC14.83□□□□□ -0.04
LTBRP36941 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 RNF34-211ENST00000613529 1449 ntTSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
LTBRP36941 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
LTBRP36941 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 ACE3P-201ENST00000423435 1973 ntBASIC14.82□□□□□ -0.04
LTBRP36941 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 HIBCH-202ENST00000392332 2463 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 KAT5-202ENST00000352980 2059 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 HNRNPA1-201ENST00000330752 1294 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 PRAME-206ENST00000406503 740 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC14.82□□□□□ -0.04
LTBRP36941 CDCA4P4-201ENST00000435216 680 ntBASIC14.82□□□□□ -0.04
LTBRP36941 CDK2-203ENST00000440311 1031 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 KRT18P62-201ENST00000446618 1287 ntBASIC14.82□□□□□ -0.04
LTBRP36941 FOXP4-AS1-205ENST00000454812 575 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC14.82□□□□□ -0.04
LTBRP36941 RHOH-206ENST00000505618 1225 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
LTBRP36941 ORMDL2-205ENST00000552672 760 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 MT1G-203ENST00000568675 628 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 AL645608.7-201ENST00000607769 351 ntTSL 4 BASIC14.82□□□□□ -0.04
LTBRP36941 AC139713.2-207ENST00000641556 1292 ntBASIC14.82□□□□□ -0.04
LTBRP36941 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
LTBRP36941 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 MARCKS-201ENST00000612661 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 PDGFRL-201ENST00000251630 1901 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
LTBRP36941 COLQ-202ENST00000383786 1482 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC14.82□□□□□ -0.04
LTBRP36941 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC14.82□□□□□ -0.04
LTBRP36941 MFSD5-202ENST00000534842 2038 ntTSL 2 BASIC14.82□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms