Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 CYP2AB1P-202ENST00000454440 1456 ntBASIC10.89□□□□□ -0.67
CKS2P33552 BAIAP3-203ENST00000421665 3875 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 AL157414.3-201ENST00000624276 1954 ntBASIC10.89□□□□□ -0.67
CKS2P33552 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 SFI1-208ENST00000432498 4162 ntAPPRIS ALT2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 RPS19-201ENST00000221975 500 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 NEK7-201ENST00000367383 586 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 PTMS-202ENST00000389462 773 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 FIGNL1-207ENST00000435566 593 ntTSL 4 BASIC10.89□□□□□ -0.67
CKS2P33552 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 KRT18P43-201ENST00000469825 1281 ntBASIC10.89□□□□□ -0.67
CKS2P33552 NT5C2-211ENST00000470299 249 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 PTK7-212ENST00000476760 902 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 AC004066.1-201ENST00000502488 802 ntBASIC10.89□□□□□ -0.67
CKS2P33552 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 YEATS4-202ENST00000548020 1100 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 KRT8P23-201ENST00000560090 1207 ntBASIC10.89□□□□□ -0.67
CKS2P33552 RARRES2P9-201ENST00000565168 469 ntBASIC10.89□□□□□ -0.67
CKS2P33552 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 KF456478.1-201ENST00000585980 472 ntTSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 RPS19-202ENST00000593863 526 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
CKS2P33552 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 AL773604.1-201ENST00000617417 272 ntBASIC10.89□□□□□ -0.67
CKS2P33552 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 ABCC5-203ENST00000382494 1923 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 KCND1-201ENST00000218176 4437 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 RERE-212ENST00000476556 4598 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 TUBBP5-201ENST00000290377 1563 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 PCDHB18P-202ENST00000526308 3197 ntBASIC10.89□□□□□ -0.67
CKS2P33552 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 TRMT10B-202ENST00000377753 2027 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 CTSB-219ENST00000530640 1389 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 CES1-203ENST00000422046 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 AC011840.2-201ENST00000563063 1520 ntBASIC10.89□□□□□ -0.67
CKS2P33552 ZCCHC14-201ENST00000268616 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 GIPR-205ENST00000590918 3289 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
CKS2P33552 RHNO1-202ENST00000461997 1655 ntAPPRIS ALT2 TSL 2 BASIC10.89□□□□□ -0.67
CKS2P33552 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
CKS2P33552 RRBP1-202ENST00000360807 3727 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 USP20-201ENST00000315480 4458 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 POLD1-214ENST00000613923 3542 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 NFATC1-203ENST00000329101 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 GPX3-210ENST00000622181 1757 ntAPPRIS ALT1 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 CASP8-202ENST00000264275 1906 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 TNRC6C-207ENST00000588847 8527 ntAPPRIS P4 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 BCL2L13-217ENST00000618481 4961 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 SLC35C2-203ENST00000372227 2505 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 NLRX1-201ENST00000292199 3744 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 POLG-202ENST00000442287 4487 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 TMEM120B-204ENST00000449592 7461 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 PAGE5-201ENST00000289619 741 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 CASC4-201ENST00000299957 3962 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 TRIM4-203ENST00000355947 3383 ntAPPRIS P4 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SPDYE17-201ENST00000412399 783 ntBASIC10.88□□□□□ -0.67
CKS2P33552 FAM230B-201ENST00000415376 1859 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 UPK3BP1-201ENST00000428678 509 ntBASIC10.88□□□□□ -0.67
CKS2P33552 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 AC008079.1-201ENST00000434390 1859 ntTSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 SPDYE11-202ENST00000450699 704 ntBASIC10.88□□□□□ -0.67
CKS2P33552 SSBP1-214ENST00000498107 636 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
CKS2P33552 HOXD8-204ENST00000544999 1235 ntAPPRIS ALT2 TSL 5 BASIC10.88□□□□□ -0.67
CKS2P33552 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC10.88□□□□□ -0.67
CKS2P33552 RNF34-208ENST00000555076 593 ntTSL 3 BASIC10.88□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 41.2 ms