Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 AC068946.1-202ENST00000318673 2745 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 CYP4F11-202ENST00000326742 2877 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 ASAP1-202ENST00000518721 5507 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 IL1RAP-209ENST00000422940 1957 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 ARSE-206ENST00000545496 2506 ntTSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 GRAP-201ENST00000284154 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 MSI2-202ENST00000322684 1860 ntAPPRIS ALT2 TSL 2 BASIC13.36□□□□□ -0.27
GDF1P27539 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
GDF1P27539 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.36□□□□□ -0.27
GDF1P27539 ZNF846-201ENST00000397902 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 CDC37-201ENST00000222005 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 RANBP1-208ENST00000430524 1389 ntTSL 3 BASIC13.35□□□□□ -0.27
GDF1P27539 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 PLIN4-202ENST00000633942 6484 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 RAB40AL-201ENST00000218249 1029 ntAPPRIS P1 BASIC13.35□□□□□ -0.27
GDF1P27539 WASHC3-201ENST00000240079 916 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 RHCE-202ENST00000340849 1087 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 DPM3-202ENST00000368399 517 ntBASIC13.35□□□□□ -0.27
GDF1P27539 TAF8-202ENST00000372978 794 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 MIR663AHG-201ENST00000427348 1213 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.35□□□□□ -0.27
GDF1P27539 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 AC011742.3-201ENST00000439053 820 ntBASIC13.35□□□□□ -0.27
GDF1P27539 AP000320.1-201ENST00000440403 471 ntTSL 3 BASIC13.35□□□□□ -0.27
GDF1P27539 KLF2P1-201ENST00000447438 1042 ntBASIC13.35□□□□□ -0.27
GDF1P27539 AC104073.2-201ENST00000453737 312 ntBASIC13.35□□□□□ -0.27
GDF1P27539 BX284668.4-201ENST00000453917 508 ntBASIC13.35□□□□□ -0.27
GDF1P27539 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC13.35□□□□□ -0.27
GDF1P27539 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 OARD1-204ENST00000464633 717 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC13.35□□□□□ -0.27
GDF1P27539 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 ACTG1P17-201ENST00000558391 1119 ntBASIC13.35□□□□□ -0.27
GDF1P27539 SYT17-208ENST00000568433 812 ntTSL 3 BASIC13.35□□□□□ -0.27
GDF1P27539 AC005324.6-201ENST00000587972 613 ntBASIC13.35□□□□□ -0.27
GDF1P27539 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 AC090164.2-201ENST00000611487 516 ntBASIC13.35□□□□□ -0.27
GDF1P27539 AC091544.8-201ENST00000619490 361 ntBASIC13.35□□□□□ -0.27
GDF1P27539 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13.35□□□□□ -0.27
GDF1P27539 CYP1B1-AS1-221ENST00000627172 995 ntTSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 PCBP2-OT1-201ENST00000634357 590 ntBASIC13.35□□□□□ -0.27
GDF1P27539 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 ALDH3A2-221ENST00000581518 2785 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
GDF1P27539 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC13.35□□□□□ -0.27
GDF1P27539 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
GDF1P27539 DNAJB9-201ENST00000249356 2715 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 USP35-204ENST00000530267 2419 ntTSL 2 BASIC13.34□□□□□ -0.27
GDF1P27539 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC13.34□□□□□ -0.27
GDF1P27539 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
GDF1P27539 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 RBFOX2-201ENST00000262829 1538 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 GPN2-202ENST00000374135 4678 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
GDF1P27539 POM121-203ENST00000434423 3750 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDF1P27539 UBXN11-202ENST00000357089 1555 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
GDF1P27539 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
GDF1P27539 RABL6-211ENST00000629216 1416 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 49.7 ms