Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 AC008687.7-202ENST00000637404 953 ntBASIC17.7■□□□□ 0.42
CHMLP26374 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC17.7■□□□□ 0.42
CHMLP26374 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 HARS-202ENST00000415192 1401 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 E2F3P2-201ENST00000447755 1422 ntBASIC17.7■□□□□ 0.42
CHMLP26374 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 FRMD5-202ENST00000417257 5011 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 DDX59-206ENST00000447706 2900 ntTSL 2 BASIC17.7■□□□□ 0.42
CHMLP26374 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 FAM86B1-203ENST00000448228 2096 ntAPPRIS P2 TSL 5 BASIC17.7■□□□□ 0.42
CHMLP26374 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 COG3-206ENST00000617493 1809 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 RWDD4-205ENST00000510968 1551 ntTSL 4 BASIC17.7■□□□□ 0.42
CHMLP26374 WDR27-201ENST00000423258 2465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.7■□□□□ 0.42
CHMLP26374 KIAA1211L-201ENST00000397899 3907 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 APBB1-203ENST00000389906 2684 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 BEND3P1-201ENST00000421591 1944 ntBASIC17.69■□□□□ 0.42
CHMLP26374 MAPKAP1-204ENST00000373498 3131 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 TUSC3-201ENST00000382020 3683 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 PSEN2-201ENST00000366782 2465 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 ARL5B-201ENST00000377275 7196 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 KLF2P4-201ENST00000451959 1225 ntBASIC17.69■□□□□ 0.42
CHMLP26374 AC100850.1-201ENST00000506768 649 ntBASIC17.69■□□□□ 0.42
CHMLP26374 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 ERICH5-202ENST00000545282 596 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 HNRNPA1P48-202ENST00000565308 961 ntBASIC17.69■□□□□ 0.42
CHMLP26374 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC17.69■□□□□ 0.42
CHMLP26374 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 AC104506.1-201ENST00000609247 429 ntBASIC17.69■□□□□ 0.42
CHMLP26374 LINC01002-220ENST00000632790 449 ntTSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 DDC-213ENST00000617822 1809 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMLP26374 TSPAN12-201ENST00000222747 2798 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 SOCS2-205ENST00000548537 3733 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.69■□□□□ 0.42
CHMLP26374 ITGB2-203ENST00000355153 2913 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 CUL1-201ENST00000325222 3064 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 PEX5-207ENST00000455147 2689 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
CHMLP26374 FBRS-201ENST00000287468 2811 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 HSD17B4-215ENST00000510025 2589 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC17.69■□□□□ 0.42
CHMLP26374 AC090643.2-201ENST00000623442 2029 ntBASIC17.69■□□□□ 0.42
CHMLP26374 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
CHMLP26374 SEPT6-204ENST00000360156 2609 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 EXO5-201ENST00000296380 2217 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 CORO7-222ENST00000574025 2826 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 TMBIM7P-202ENST00000641474 1516 ntBASIC17.68■□□□□ 0.42
CHMLP26374 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 KLHL42-201ENST00000381271 6703 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMLP26374 PRKAB1-201ENST00000229328 2610 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 KATNA1-201ENST00000335643 1564 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 BOLA2P3-201ENST00000404566 256 ntBASIC17.68■□□□□ 0.42
CHMLP26374 MIR1909-201ENST00000411312 80 ntBASIC17.68■□□□□ 0.42
CHMLP26374 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC17.68■□□□□ 0.42
CHMLP26374 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 HOMER2P2-201ENST00000451621 847 ntBASIC17.68■□□□□ 0.42
CHMLP26374 AC011447.3-204ENST00000585498 883 ntTSL 2 BASIC17.68■□□□□ 0.42
CHMLP26374 RPS24-214ENST00000613865 538 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMLP26374 PFAS-212ENST00000625942 396 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMLP26374 AL391650.2-201ENST00000640097 941 ntTSL 5 BASIC17.68■□□□□ 0.42
CHMLP26374 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 AMIGO2-201ENST00000266581 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 XKR9-203ENST00000520030 1799 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
CHMLP26374 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC17.68■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 68.6 ms