Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 PARP16-201ENST00000261888 2731 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
CD40P25942 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 GOSR2-203ENST00000415811 2171 ntTSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 MSR1-201ENST00000262101 2132 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 AC015688.4-201ENST00000580780 1647 ntBASIC12.67□□□□□ -0.38
CD40P25942 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 ALAS2-202ENST00000335854 1795 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 CIT-219ENST00000612548 1799 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
CD40P25942 RNF25-201ENST00000295704 1914 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 UBTF-204ENST00000436088 2738 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 AC211486.1-201ENST00000275590 980 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 SYCE2-201ENST00000293695 1231 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 AL121901.1-201ENST00000419613 366 ntTSL 3 BASIC12.67□□□□□ -0.38
CD40P25942 AC078875.1-201ENST00000431907 724 ntBASIC12.67□□□□□ -0.38
CD40P25942 AL133466.1-201ENST00000447582 150 ntBASIC12.67□□□□□ -0.38
CD40P25942 AL139412.1-202ENST00000452465 675 ntTSL 3 BASIC12.67□□□□□ -0.38
CD40P25942 TSACC-208ENST00000481479 741 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.67□□□□□ -0.38
CD40P25942 RERG-205ENST00000537647 935 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 TMEM219-203ENST00000561899 1249 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC12.67□□□□□ -0.38
CD40P25942 AC127024.2-201ENST00000581019 789 ntTSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC12.67□□□□□ -0.38
CD40P25942 CU633904.3-201ENST00000624042 1029 ntBASIC12.67□□□□□ -0.38
CD40P25942 LINC01668-201ENST00000635001 513 ntTSL 4 BASIC12.67□□□□□ -0.38
CD40P25942 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 MTMR6-201ENST00000381801 5659 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 FAS-202ENST00000352159 1722 ntTSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 ANO10-213ENST00000451430 2019 ntTSL 2 BASIC12.67□□□□□ -0.38
CD40P25942 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
CD40P25942 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 PACSIN2-201ENST00000263246 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 ID2-203ENST00000396290 1362 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 TMBIM7P-202ENST00000641474 1516 ntBASIC12.67□□□□□ -0.38
CD40P25942 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 ZNF586-202ENST00000396150 1977 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 SEZ6L-209ENST00000529632 6534 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
CD40P25942 SLCO5A1-203ENST00000524945 3725 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 TMEM189-202ENST00000371652 7714 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 FAM45A-201ENST00000361432 1648 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 SASH3-201ENST00000356892 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 HGSNAT-207ENST00000521576 2332 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD40P25942 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 KRT85-201ENST00000257901 2447 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 MAP2K3-201ENST00000316920 1246 ntTSL 5 BASIC12.66□□□□□ -0.38
CD40P25942 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 DKFZp779M0652-201ENST00000378779 649 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
CD40P25942 ACTG1P2-201ENST00000415776 1125 ntBASIC12.66□□□□□ -0.38
CD40P25942 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC12.66□□□□□ -0.38
CD40P25942 ACTG1P11-201ENST00000425411 1125 ntBASIC12.66□□□□□ -0.38
CD40P25942 DNAJC27-AS1-207ENST00000451291 488 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.66□□□□□ -0.38
CD40P25942 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.66□□□□□ -0.38
CD40P25942 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
CD40P25942 TMEM91-211ENST00000544232 725 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.66□□□□□ -0.38
CD40P25942 L34079.1-201ENST00000594374 393 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC12.66□□□□□ -0.38
CD40P25942 AC079325.2-202ENST00000641031 462 ntAPPRIS ALT2 BASIC12.66□□□□□ -0.38
CD40P25942 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC12.66□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 54.7 ms