Protein–RNA interactions for Protein: P22736

NR4A1, Nuclear receptor subfamily 4 group A member 1, humanhuman

Predictions only

Length 598 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1P22736 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
NR4A1P22736 LINC01792-201ENST00000452787 2050 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 COL6A2-203ENST00000397763 3101 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 L3MBTL1-206ENST00000427442 3157 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 SLC26A5-202ENST00000339444 2474 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 HADH-202ENST00000403312 1752 ntTSL 5 BASIC13.81□□□□□ -0.2
NR4A1P22736 DDX3X-201ENST00000399959 5399 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 TYK2-205ENST00000525621 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
NR4A1P22736 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 ELK1-201ENST00000247161 2695 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 PCDHGA11-201ENST00000398587 4647 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 PLCD4-202ENST00000417849 2738 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 TASP1-201ENST00000337743 2352 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 CAMKV-202ENST00000463537 2818 ntTSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 HIPK1-205ENST00000369558 8157 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 TTC8-203ENST00000346301 2058 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 OLA1-202ENST00000344357 1656 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 H1FOO-201ENST00000324382 1067 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 LCE5A-201ENST00000334269 819 ntAPPRIS P1 TSL 3 BASIC13.8□□□□□ -0.2
NR4A1P22736 AC073349.1-201ENST00000340779 1062 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.8□□□□□ -0.2
NR4A1P22736 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC13.8□□□□□ -0.2
NR4A1P22736 AL022316.1-201ENST00000428765 572 ntTSL 4 BASIC13.8□□□□□ -0.2
NR4A1P22736 TSPY16P-201ENST00000449843 468 ntBASIC13.8□□□□□ -0.2
NR4A1P22736 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 AL512361.1-201ENST00000554200 418 ntBASIC13.8□□□□□ -0.2
NR4A1P22736 AC010336.2-201ENST00000564226 506 ntBASIC13.8□□□□□ -0.2
NR4A1P22736 LINC00207-204ENST00000605505 666 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 AC105277.1-203ENST00000635492 1293 ntTSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC13.8□□□□□ -0.2
NR4A1P22736 SATB2-211ENST00000614512 4972 ntTSL 5 BASIC13.8□□□□□ -0.2
NR4A1P22736 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 HNRNPH1-202ENST00000356731 3667 ntAPPRIS P1 TSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 AC012617.1-204ENST00000586340 2305 ntBASIC13.8□□□□□ -0.2
NR4A1P22736 PEG13-201ENST00000631594 5667 ntBASIC13.8□□□□□ -0.2
NR4A1P22736 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.8□□□□□ -0.2
NR4A1P22736 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC13.8□□□□□ -0.2
NR4A1P22736 BRSK1-206ENST00000590333 2977 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 PLIN3-202ENST00000585479 1535 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 GTF2IRD2-201ENST00000451013 3558 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
NR4A1P22736 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 LRSAM1-203ENST00000373322 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 B3GAT1-202ENST00000392580 3522 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 AC008278.1-201ENST00000431117 568 ntTSL 4 BASIC13.79□□□□□ -0.2
NR4A1P22736 HIST3H2BA-201ENST00000436555 524 ntBASIC13.79□□□□□ -0.2
NR4A1P22736 LINC01160-201ENST00000441004 768 ntTSL 3 BASIC13.79□□□□□ -0.2
NR4A1P22736 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.79□□□□□ -0.2
NR4A1P22736 PTK7-212ENST00000476760 902 ntTSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.79□□□□□ -0.2
NR4A1P22736 AC009407.1-201ENST00000568958 598 ntBASIC13.79□□□□□ -0.2
NR4A1P22736 MIR4745-201ENST00000577608 62 ntBASIC13.79□□□□□ -0.2
NR4A1P22736 ARMC7-205ENST00000584947 445 ntTSL 3 BASIC13.79□□□□□ -0.2
NR4A1P22736 SPIB-207ENST00000597855 564 ntTSL 4 BASIC13.79□□□□□ -0.2
NR4A1P22736 AC097359.3-201ENST00000603982 1210 ntBASIC13.79□□□□□ -0.2
NR4A1P22736 LANCL3-202ENST00000378621 10298 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 ANKZF1-201ENST00000323348 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 CAMSAP3-201ENST00000160298 3889 ntAPPRIS P3 TSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 ZDHHC11-209ENST00000511539 1303 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC13.79□□□□□ -0.2
NR4A1P22736 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 CALCB-203ENST00000533448 2097 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
NR4A1P22736 OSBPL1A-201ENST00000319481 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
NR4A1P22736 KLHL8-201ENST00000273963 5621 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 78.6 ms