Protein–RNA interactions for Protein: P12004

PCNA, Proliferating cell nuclear antigen, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCNAP12004 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 PNPLA5-204ENST00000593866 2197 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 ANK1-205ENST00000347528 8237 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 TPM3-205ENST00000328159 1771 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 SALL4P5-201ENST00000419001 1760 ntBASIC14.44□□□□□ -0.1
PCNAP12004 RSPH6A-203ENST00000600188 1751 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 ARHGAP27-203ENST00000428638 4242 ntAPPRIS P2 TSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 SYNGAP1-203ENST00000428982 4339 ntTSL 5 BASIC14.44□□□□□ -0.1
PCNAP12004 C4B-201ENST00000425700 5237 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 USP3-204ENST00000540797 5474 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC14.44□□□□□ -0.1
PCNAP12004 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
PCNAP12004 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 KIAA1161-201ENST00000297625 6398 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 TAF8-203ENST00000372982 1805 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 VPS26B-201ENST00000281187 3691 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 PPP1R27-202ENST00000570394 1443 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 UMODL1-AS1-201ENST00000329015 2141 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 AC098614.1-201ENST00000368528 745 ntBASIC14.43□□□□□ -0.1
PCNAP12004 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 ATP5D-202ENST00000395633 704 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 AC007969.1-201ENST00000433675 447 ntBASIC14.43□□□□□ -0.1
PCNAP12004 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 FYCO1-203ENST00000438446 1072 ntTSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 AL513217.1-202ENST00000458139 600 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 AC011495.1-201ENST00000498085 584 ntBASIC14.43□□□□□ -0.1
PCNAP12004 LINC02242-201ENST00000507298 641 ntTSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 AC068587.3-201ENST00000526613 355 ntBASIC14.43□□□□□ -0.1
PCNAP12004 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 MIR5189-201ENST00000577370 114 ntBASIC14.43□□□□□ -0.1
PCNAP12004 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 AC004466.1-201ENST00000599515 1080 ntBASIC14.43□□□□□ -0.1
PCNAP12004 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 ADAM12-201ENST00000368676 3313 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 SELPLG-202ENST00000388962 1613 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 ZMYM3-206ENST00000373988 6021 ntAPPRIS ALT1 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC14.43□□□□□ -0.1
PCNAP12004 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 CPSF7-201ENST00000340437 3695 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC14.43□□□□□ -0.1
PCNAP12004 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC14.43□□□□□ -0.1
PCNAP12004 THBD-201ENST00000377103 4109 ntAPPRIS P1 BASIC14.43□□□□□ -0.1
PCNAP12004 AMMECR1-203ENST00000372059 3052 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
PCNAP12004 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
PCNAP12004 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
PCNAP12004 FRMD8-202ENST00000355991 3514 ntTSL 2 BASIC14.42□□□□□ -0.1
PCNAP12004 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
PCNAP12004 CYP1A1-207ENST00000567032 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.42□□□□□ -0.1
PCNAP12004 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 XPR1-201ENST00000367589 4126 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 TNK2-202ENST00000381916 4223 ntTSL 2 BASIC14.42□□□□□ -0.1
PCNAP12004 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
PCNAP12004 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms