Protein–RNA interactions for Protein: P04406

GAPDH, Glyceraldehyde-3-phosphate dehydrogenase, humanhuman

Known RBP Predictions only

Length 335 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDHP04406 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC12.41□□□□□ -0.42
GAPDHP04406 ETV4-203ENST00000538265 2147 ntTSL 2 BASIC12.41□□□□□ -0.42
GAPDHP04406 ARHGEF9-230ENST00000637178 2145 ntTSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 ACAN-202ENST00000439576 8840 ntAPPRIS P2 TSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC12.41□□□□□ -0.42
GAPDHP04406 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 AC006974.1-201ENST00000637928 1501 ntTSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 ZNF890P-201ENST00000422060 1352 ntTSL 2 BASIC12.41□□□□□ -0.42
GAPDHP04406 KDM5B-202ENST00000367264 6449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 PLAGL1-201ENST00000354765 3663 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 DENND1C-202ENST00000543576 2395 ntAPPRIS ALT2 TSL 2 BASIC12.41□□□□□ -0.42
GAPDHP04406 CUX2-201ENST00000261726 6844 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
GAPDHP04406 YTHDF3-205ENST00000539294 5163 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
GAPDHP04406 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 FIG4-201ENST00000230124 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 MED12L-202ENST00000309237 2862 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 AC093525.8-201ENST00000624099 1342 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 POLN-210ENST00000511885 3253 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
GAPDHP04406 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 INE2-201ENST00000630399 1874 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 ADCY6-201ENST00000307885 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 C5orf38-207ENST00000515640 1441 ntAPPRIS ALT2 TSL 3 BASIC12.4□□□□□ -0.42
GAPDHP04406 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 AIP-201ENST00000279146 1221 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 FAM159B-201ENST00000389074 847 ntAPPRIS P1 TSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 RAC2-203ENST00000405484 842 ntAPPRIS ALT1 TSL 3 BASIC12.4□□□□□ -0.42
GAPDHP04406 AC098850.1-201ENST00000419919 790 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 AL162726.2-201ENST00000438986 1017 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 HNRNPA1P13-201ENST00000510646 963 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 NDUFAF2-203ENST00000511107 586 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 AC022447.6-201ENST00000515522 438 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 AP001582.1-201ENST00000525856 295 ntBASIC12.4□□□□□ -0.42
GAPDHP04406 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC12.4□□□□□ -0.42
GAPDHP04406 SMIM22-202ENST00000586440 549 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 SNHG8-201ENST00000602414 672 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 SNHG8-205ENST00000602819 470 ntTSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 EIF6-209ENST00000621148 1054 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
GAPDHP04406 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC12.4□□□□□ -0.42
GAPDHP04406 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 TM9SF1-202ENST00000396854 2055 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 GPR68-204ENST00000535815 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC12.4□□□□□ -0.42
GAPDHP04406 USP33-202ENST00000370792 2917 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC12.4□□□□□ -0.42
GAPDHP04406 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
GAPDHP04406 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC12.4□□□□□ -0.43
GAPDHP04406 DNER-201ENST00000341772 3260 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GAPDHP04406 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GAPDHP04406 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC12.4□□□□□ -0.43
GAPDHP04406 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.43
GAPDHP04406 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC12.4□□□□□ -0.43
GAPDHP04406 NPRL3-212ENST00000620134 3203 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 CYB5R2-204ENST00000524790 1338 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
GAPDHP04406 SLCO2B1-217ENST00000532236 2593 ntAPPRIS ALT2 TSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 ZBED1-203ENST00000381223 4510 ntAPPRIS P1 TSL 2 BASIC12.39□□□□□ -0.43
GAPDHP04406 PCDHB3-201ENST00000231130 3355 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
GAPDHP04406 TCAM1P-207ENST00000485295 1537 ntBASIC12.39□□□□□ -0.43
GAPDHP04406 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 GCLC-201ENST00000229416 3813 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC12.39□□□□□ -0.43
GAPDHP04406 CRYGN-201ENST00000337323 754 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
GAPDHP04406 FAM104B-202ENST00000358460 1179 ntAPPRIS P3 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms