Protein–RNA interactions for Protein: P02708

CHRNA1, Acetylcholine receptor subunit alpha, humanhuman

Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1P02708 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC15.85■□□□□ 0.13
CHRNA1P02708 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 ARMCX1-201ENST00000372829 2141 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 PMP22-209ENST00000612492 1822 ntAPPRIS P1 TSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 EPHB4-201ENST00000358173 4329 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 AJ011931.1-201ENST00000618749 2492 ntBASIC15.85■□□□□ 0.13
CHRNA1P02708 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 STBD1-201ENST00000237642 3420 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 KAT5-216ENST00000534650 1875 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 NFATC4-201ENST00000250373 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 NPFF-201ENST00000267017 592 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CHRNA1P02708 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
CHRNA1P02708 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 Z69890.1-201ENST00000382990 339 ntBASIC15.85■□□□□ 0.13
CHRNA1P02708 CD300A-204ENST00000392625 1163 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 PHACTR2-204ENST00000397980 745 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 C1QA-202ENST00000402322 976 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 AL355334.1-201ENST00000417713 215 ntBASIC15.85■□□□□ 0.13
CHRNA1P02708 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 AC243961.1-201ENST00000432559 384 ntTSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 LINC00441-201ENST00000433480 1143 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 AC245056.1-201ENST00000437631 384 ntTSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 MYL7-209ENST00000458240 791 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 TMCO5B-205ENST00000530020 894 ntBASIC15.85■□□□□ 0.13
CHRNA1P02708 FANCA-204ENST00000534992 1088 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC15.85■□□□□ 0.13
CHRNA1P02708 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 LMF2-201ENST00000216080 2658 ntTSL 2 BASIC15.85■□□□□ 0.13
CHRNA1P02708 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 SERPINB9P1-202ENST00000545177 1375 ntTSL 3 BASIC15.85■□□□□ 0.13
CHRNA1P02708 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.85■□□□□ 0.13
CHRNA1P02708 CDK16-202ENST00000357227 3144 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 RTKN-202ENST00000272430 2142 ntAPPRIS ALT1 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 RGS6-210ENST00000553530 5685 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
CHRNA1P02708 MRGPRX4-201ENST00000314254 1444 ntAPPRIS P1 BASIC15.85■□□□□ 0.13
CHRNA1P02708 CCDC197-206ENST00000640978 1429 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
CHRNA1P02708 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 CPSF7-202ENST00000394888 3650 ntAPPRIS P4 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 DUS2-201ENST00000358896 1933 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 GSN-215ENST00000545652 2428 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA1P02708 VSIG10-202ENST00000359236 4946 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 LETMD1-203ENST00000418425 2123 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 TAC3-208ENST00000441881 731 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA1P02708 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA1P02708 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC15.84■□□□□ 0.13
CHRNA1P02708 CTBP2P4-201ENST00000513884 920 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 AC129102.1-201ENST00000535755 525 ntTSL 4 BASIC15.84■□□□□ 0.13
CHRNA1P02708 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 PLIN5-202ENST00000586133 907 ntTSL 3 BASIC15.84■□□□□ 0.13
CHRNA1P02708 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 CR589904.1-202ENST00000611154 660 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA1P02708 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 MIR6858-201ENST00000620733 67 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 AL591471.1-201ENST00000621855 229 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 AL161773.1-201ENST00000624845 863 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 AC005618.3-201ENST00000624928 458 ntBASIC15.84■□□□□ 0.13
CHRNA1P02708 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 PDE4DIP-201ENST00000313431 5676 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
CHRNA1P02708 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 DYM-201ENST00000269445 5049 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 ANXA8L1-202ENST00000611655 1398 ntTSL 2 BASIC15.84■□□□□ 0.13
CHRNA1P02708 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC15.84■□□□□ 0.13
CHRNA1P02708 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
CHRNA1P02708 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
CHRNA1P02708 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 53.4 ms