Protein–RNA interactions for Protein: P01906

HLA-DQA2, HLA class II histocompatibility antigen, DQ alpha 2 chain, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA2P01906 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PPP1R15B-201ENST00000367188 5227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CYP26A1-202ENST00000371531 2245 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 ASPH-202ENST00000379449 1603 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 NEU3-206ENST00000532963 1643 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 FAM214B-202ENST00000378557 3070 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 GOLGA8R-201ENST00000327271 1896 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CKS1B-202ENST00000368436 820 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 KLF2P2-201ENST00000416807 1039 ntBASIC13.32□□□□□ -0.28
HLA-DQA2P01906 DFFBP1-201ENST00000433250 979 ntBASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AL161785.3-201ENST00000435157 395 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AC087294.1-202ENST00000439136 487 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AC087294.1-201ENST00000580291 1152 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AC092070.4-201ENST00000599803 507 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 NDUFS7-219ENST00000620479 754 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 COL6A2-202ENST00000310645 3446 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 NDUFA10-201ENST00000252711 4915 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SCAF4-202ENST00000399804 4127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 MICB-201ENST00000252229 2446 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 INHBE-201ENST00000266646 2429 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SALL4P5-201ENST00000419001 1760 ntBASIC13.32□□□□□ -0.28
HLA-DQA2P01906 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SLC7A8-212ENST00000529705 1819 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 TEAD4-203ENST00000397122 1396 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 TDG-209ENST00000544861 1387 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 ASNA1-204ENST00000591090 1368 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CEMIP-203ENST00000394685 7357 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 OS9-204ENST00000389146 2091 ntTSL 2 BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 AGGF1P1-201ENST00000509500 2073 ntBASIC13.32□□□□□ -0.28
HLA-DQA2P01906 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SPOCK2-201ENST00000317376 5328 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
HLA-DQA2P01906 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 PRKD2-206ENST00000595515 3012 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MLXIPL-201ENST00000313375 3278 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MLXIPL-206ENST00000434326 3252 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 CBWD2-204ENST00000433343 1411 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 CCDC140-201ENST00000295226 1699 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MYO7A-202ENST00000409709 7462 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 GFAP-214ENST00000588735 6538 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 TBKBP1-201ENST00000361722 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 TBC1D2-203ENST00000375064 3174 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 RBL1-202ENST00000373664 5684 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC005840.4-201ENST00000541242 2494 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 USP19-208ENST00000453664 4719 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 PPP1R26P4-201ENST00000619065 3527 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC152010.1-201ENST00000415779 2006 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 ING1-204ENST00000375775 1074 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC087499.6-201ENST00000411576 835 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC092183.1-201ENST00000469884 875 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 KRT18P25-201ENST00000508931 1278 ntBASIC13.31□□□□□ -0.28
HLA-DQA2P01906 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC13.31□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms