Protein–RNA interactions for Protein: O95628

CNOT4, CCR4-NOT transcription complex subunit 4, humanhuman

Known RBP Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4O95628 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 BX088702.1-201ENST00000610784 235 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 TET2-207ENST00000513237 10166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 TET2-209ENST00000540549 10166 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 MRPS7-201ENST00000245539 1406 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 CRYBG2-201ENST00000308182 5245 ntAPPRIS P5 TSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 FRMD5-201ENST00000402883 4091 ntTSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 GOLGA8DP-202ENST00000341390 2184 ntBASIC13.18□□□□□ -0.3
CNOT4O95628 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 BVES-201ENST00000314641 5567 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 WSCD2-206ENST00000547525 4481 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
CNOT4O95628 CTSD-201ENST00000236671 2123 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC13.18□□□□□ -0.3
CNOT4O95628 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC13.18□□□□□ -0.3
CNOT4O95628 NISCH-202ENST00000420808 2589 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
CNOT4O95628 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 ST7L-207ENST00000369669 1743 ntTSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 AC079781.5-202ENST00000641784 3743 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
CNOT4O95628 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CLRN1-203ENST00000328863 738 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 AL138767.1-201ENST00000354527 744 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ELK2AP-201ENST00000392510 1007 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 BTBD6P1-201ENST00000412176 1267 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 SLC25A24P2-201ENST00000415059 510 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 CHMP1AP1-201ENST00000445563 662 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 ATP6V0CP2-201ENST00000469409 207 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 ZNF767P-206ENST00000513792 565 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 NDUFC1-210ENST00000539387 725 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CNOT4O95628 HNRNPA1P48-202ENST00000565308 961 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.17□□□□□ -0.3
CNOT4O95628 AC108134.4-201ENST00000570700 302 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 TSR1-204ENST00000576112 1290 ntTSL 5 BASIC13.17□□□□□ -0.3
CNOT4O95628 CYGB-203ENST00000589145 788 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 OCEL1-213ENST00000601529 942 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 IKZF1-217ENST00000612658 962 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CR381653.1-201ENST00000622961 812 ntTSL 3 BASIC13.17□□□□□ -0.3
CNOT4O95628 ABBA01031663.1-201ENST00000635630 790 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 ACE3P-201ENST00000423435 1973 ntBASIC13.17□□□□□ -0.3
CNOT4O95628 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CNOT4O95628 AC011899.2-202ENST00000438047 4302 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 SAMD4A-202ENST00000392067 6833 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 LINC00900-201ENST00000499809 3322 ntTSL 2 BASIC13.17□□□□□ -0.3
CNOT4O95628 PCDHGA6-202ENST00000610583 5650 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
CNOT4O95628 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
CNOT4O95628 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC13.17□□□□□ -0.3
CNOT4O95628 GABRB3-219ENST00000636466 4509 ntTSL 5 BASIC13.17□□□□□ -0.3
CNOT4O95628 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 HIPK3-202ENST00000379016 7345 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 AIFM2-202ENST00000373248 2570 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 CMTR2-201ENST00000338099 4869 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 ITGAM-202ENST00000544665 4718 ntAPPRIS ALT1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 MBD1-205ENST00000353909 2820 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 FYN-202ENST00000354650 3628 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
CNOT4O95628 DPYSL2-204ENST00000521913 4805 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 AC007686.3-201ENST00000619017 3487 ntBASIC13.16□□□□□ -0.3
CNOT4O95628 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
CNOT4O95628 KNSTRN-201ENST00000249776 1714 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 111.5 ms