Protein–RNA interactions for Protein: O95243

MBD4, Methyl-CpG-binding domain protein 4, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4O95243 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD4O95243 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD4O95243 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC17.49■□□□□ 0.39
MBD4O95243 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 SLC7A4-202ENST00000403586 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 AC018629.1-201ENST00000623381 1736 ntBASIC17.49■□□□□ 0.39
MBD4O95243 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 CAMK2A-203ENST00000398376 1493 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 SIPA1-203ENST00000527525 3235 ntTSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
MBD4O95243 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
MBD4O95243 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 LINC00552-201ENST00000625151 2579 ntBASIC17.48■□□□□ 0.39
MBD4O95243 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 LINC01648-201ENST00000445180 1519 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.48■□□□□ 0.39
MBD4O95243 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 GABPB1-202ENST00000359031 1633 ntTSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 AC103702.1-201ENST00000548801 2630 ntBASIC17.48■□□□□ 0.39
MBD4O95243 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 IYD-204ENST00000392255 1180 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 HNRNPA1P41-201ENST00000397777 928 ntBASIC17.48■□□□□ 0.39
MBD4O95243 NIF3L1-205ENST00000409588 1269 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 KRTAP19-9P-201ENST00000421795 191 ntBASIC17.48■□□□□ 0.39
MBD4O95243 CHL1-AS2-203ENST00000452919 726 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 AC005920.3-202ENST00000512717 789 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD4O95243 CHRNA5-203ENST00000559554 1051 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD4O95243 IGHV3OR16-16-201ENST00000563644 343 ntBASIC17.48■□□□□ 0.39
MBD4O95243 RN7SL774P-201ENST00000577467 290 ntBASIC17.48■□□□□ 0.39
MBD4O95243 AC011447.3-201ENST00000590606 722 ntTSL 3 BASIC17.48■□□□□ 0.39
MBD4O95243 AC010323.1-201ENST00000598884 580 ntAPPRIS P1 TSL 4 BASIC17.48■□□□□ 0.39
MBD4O95243 AC091544.8-201ENST00000619490 361 ntBASIC17.48■□□□□ 0.39
MBD4O95243 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC17.48■□□□□ 0.39
MBD4O95243 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 C1orf228-218ENST00000458657 1818 ntAPPRIS P2 TSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 NMBR-201ENST00000258042 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 HNRNPU-204ENST00000440865 3207 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 LGALS8-203ENST00000341872 2437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
MBD4O95243 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
MBD4O95243 KIF18B-204ENST00000593135 2745 ntAPPRIS P3 TSL 5 BASIC17.48■□□□□ 0.39
MBD4O95243 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD4O95243 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 CHIA-204ENST00000369740 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 PRDM1-203ENST00000369096 5164 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC17.47■□□□□ 0.39
MBD4O95243 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 HIST1H2AD-201ENST00000341023 393 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MBD4O95243 DUSP13-202ENST00000372700 781 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD4O95243 UBE4B-203ENST00000377153 1273 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD4O95243 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
MBD4O95243 GAS5-209ENST00000430245 723 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD4O95243 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC17.47■□□□□ 0.39
MBD4O95243 IGHJ2P-201ENST00000454480 60 ntBASIC17.47■□□□□ 0.39
MBD4O95243 TPT1P11-201ENST00000458482 498 ntBASIC17.47■□□□□ 0.39
MBD4O95243 DUSP13-206ENST00000472493 920 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 AGTRAP-212ENST00000510878 849 ntTSL 3 BASIC17.47■□□□□ 0.39
MBD4O95243 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC17.47■□□□□ 0.39
MBD4O95243 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
MBD4O95243 AC008133.1-201ENST00000584688 557 ntTSL 4 BASIC17.47■□□□□ 0.39
MBD4O95243 AL157813.1-201ENST00000612996 587 ntBASIC17.47■□□□□ 0.39
MBD4O95243 AC092299.1-201ENST00000632679 757 ntBASIC17.47■□□□□ 0.39
MBD4O95243 AC004706.3-207ENST00000634823 977 ntTSL 5 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 36.2 ms