Protein–RNA interactions for Protein: O14983

ATP2A1, Sarcoplasmic/endoplasmic reticulum calcium ATPase 1, humanhuman

Predictions only

Length 1,001 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A1O14983 IRX6-201ENST00000290552 3128 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 CCDC85A-201ENST00000407595 3982 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
ATP2A1O14983 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 NEK11-210ENST00000510769 2149 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 TSC2-203ENST00000382538 5264 ntAPPRIS ALT2 TSL 2 BASIC16.79■□□□□ 0.28
ATP2A1O14983 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
ATP2A1O14983 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.79■□□□□ 0.28
ATP2A1O14983 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 JAKMIP1-205ENST00000410077 1835 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ARHGAP25-216ENST00000497079 1843 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 CRYBB1-201ENST00000215939 1102 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 NDUFB8-201ENST00000299166 671 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 OR2K2-202ENST00000374428 1038 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 CSTF3-202ENST00000431742 715 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ST13P19-201ENST00000442505 1124 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 LINC00642-202ENST00000442515 670 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A1O14983 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 AC008723.1-201ENST00000506922 207 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 IGLV3-15-201ENST00000518356 244 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 LY6E-208ENST00000520531 490 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 NKX3-1-202ENST00000523261 713 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC16.78■□□□□ 0.28
ATP2A1O14983 PGAM1P5-201ENST00000548011 764 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 NAT9-220ENST00000582870 896 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC16.78■□□□□ 0.28
ATP2A1O14983 AL109837.1-201ENST00000603272 613 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 Z84492.1-201ENST00000606589 408 ntAPPRIS P1 TSL 3 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 LINC01783-202ENST00000614408 828 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 BX284668.2-205ENST00000619677 828 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 SNX1-214ENST00000625244 324 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 ARMCX6-207ENST00000538627 1758 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 SAMD4A-204ENST00000554335 3003 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 ILF3-210ENST00000588657 2697 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
ATP2A1O14983 FARS2-202ENST00000324331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
ATP2A1O14983 FSD2-202ENST00000541889 2356 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 RHOT1-203ENST00000358365 3297 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
ATP2A1O14983 OR2I1P-210ENST00000642037 4691 ntBASIC16.78■□□□□ 0.28
ATP2A1O14983 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2A1O14983 SNPH-202ENST00000381873 4995 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 TSPAN5-201ENST00000305798 3365 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 LINC00665-205ENST00000585356 1557 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
ATP2A1O14983 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 AK5-203ENST00000354567 3251 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 AC006486.2-201ENST00000624246 2199 ntBASIC16.77■□□□□ 0.28
ATP2A1O14983 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 GSG1L-201ENST00000380897 1173 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 AL627231.1-201ENST00000394467 1125 ntBASIC16.77■□□□□ 0.28
ATP2A1O14983 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2A1O14983 GAS5-209ENST00000430245 723 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2A1O14983 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 TAPBP-241ENST00000489157 1299 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 IGHVIII-5-2-201ENST00000522505 261 ntBASIC16.77■□□□□ 0.28
ATP2A1O14983 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2A1O14983 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.77■□□□□ 0.28
ATP2A1O14983 MIR3677-201ENST00000578964 60 ntBASIC16.77■□□□□ 0.28
ATP2A1O14983 IGFLR1-211ENST00000592889 782 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 CNOT7-213ENST00000628418 432 ntTSL 5 BASIC16.77■□□□□ 0.28
ATP2A1O14983 BCAR3-201ENST00000260502 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
ATP2A1O14983 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.77■□□□□ 0.28
ATP2A1O14983 DEGS2-201ENST00000305631 4352 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms