Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 RN7SL684P-201ENST00000465665 294 ntBASIC24.38■■□□□ 1.49
CUX2O14529 OR2A1-AS1-203ENST00000468575 568 ntBASIC24.38■■□□□ 1.49
CUX2O14529 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC24.38■■□□□ 1.49
CUX2O14529 AC145285.5-201ENST00000562217 361 ntBASIC24.38■■□□□ 1.49
CUX2O14529 AL009176.1-201ENST00000607876 650 ntBASIC24.38■■□□□ 1.49
CUX2O14529 AC020658.6-201ENST00000623564 1870 ntBASIC24.38■■□□□ 1.49
CUX2O14529 SLC29A1-205ENST00000371740 2219 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUX2O14529 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC24.38■■□□□ 1.49
CUX2O14529 PSMD14-201ENST00000409682 1954 ntAPPRIS P1 TSL 1 (best) BASIC24.38■■□□□ 1.49
CUX2O14529 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 CCNC-209ENST00000520371 2186 ntTSL 5 BASIC24.37■■□□□ 1.49
CUX2O14529 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC24.37■■□□□ 1.49
CUX2O14529 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC24.37■■□□□ 1.49
CUX2O14529 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 TPD52L2-203ENST00000348257 2237 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 ANKRD42-208ENST00000531895 1887 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 DNM2-202ENST00000359692 3588 ntAPPRIS P5 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC24.37■■□□□ 1.49
CUX2O14529 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC24.37■■□□□ 1.49
CUX2O14529 PPP1R2P10-201ENST00000393023 595 ntBASIC24.37■■□□□ 1.49
CUX2O14529 IGSF23-201ENST00000402988 989 ntAPPRIS P2 TSL 3 BASIC24.37■■□□□ 1.49
CUX2O14529 AP001628.2-201ENST00000420273 784 ntTSL 2 BASIC24.37■■□□□ 1.49
CUX2O14529 AL357033.2-201ENST00000430184 739 ntTSL 3 BASIC24.37■■□□□ 1.49
CUX2O14529 ALDOAP1-201ENST00000491506 1078 ntBASIC24.37■■□□□ 1.49
CUX2O14529 HNRNPA1P56-201ENST00000505767 954 ntBASIC24.37■■□□□ 1.49
CUX2O14529 Metazoa_SRP.173-201ENST00000614020 273 ntBASIC24.37■■□□□ 1.49
CUX2O14529 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 RNPS1-220ENST00000566458 2037 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 CALD1-206ENST00000424922 2124 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC24.37■■□□□ 1.49
CUX2O14529 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 CYP27B1-201ENST00000228606 2540 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 C18orf15-201ENST00000623680 2534 ntBASIC24.36■■□□□ 1.49
CUX2O14529 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 SLC6A2-209ENST00000568943 2471 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 HOXD3-201ENST00000249440 2303 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 RSPO1-202ENST00000401068 2320 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 LINP1-201ENST00000417112 917 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 CNBP-202ENST00000441626 1040 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 GIMAP6-202ENST00000493969 876 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 MARK2P17-201ENST00000498560 841 ntBASIC24.36■■□□□ 1.49
CUX2O14529 PRSS3P1-201ENST00000503996 742 ntBASIC24.36■■□□□ 1.49
CUX2O14529 IMMP1L-215ENST00000534812 612 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC24.36■■□□□ 1.49
CUX2O14529 AC113385.2-201ENST00000614465 762 ntBASIC24.36■■□□□ 1.49
CUX2O14529 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 DDX42-208ENST00000578681 4337 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC24.36■■□□□ 1.49
CUX2O14529 TMEM132D-AS2-201ENST00000542578 1568 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 SLC18A1-207ENST00000519026 1980 ntTSL 5 BASIC24.36■■□□□ 1.49
CUX2O14529 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 SWAP70-202ENST00000447399 3538 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CUX2O14529 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC24.36■■□□□ 1.49
CUX2O14529 LINC00905-203ENST00000588838 1414 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 AC009093.10-201ENST00000641956 1442 ntBASIC24.35■■□□□ 1.49
CUX2O14529 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 CD5L-201ENST00000368174 2191 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC24.35■■□□□ 1.49
CUX2O14529 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 F10-203ENST00000409306 1450 ntTSL 3 BASIC24.35■■□□□ 1.49
CUX2O14529 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC24.35■■□□□ 1.49
CUX2O14529 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC24.35■■□□□ 1.49
CUX2O14529 GH1-203ENST00000351388 685 ntTSL 2 BASIC24.35■■□□□ 1.49
CUX2O14529 PLA2G6-210ENST00000435484 612 ntTSL 4 BASIC24.35■■□□□ 1.49
CUX2O14529 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC24.35■■□□□ 1.49
CUX2O14529 AC005042.2-201ENST00000449526 510 ntTSL 4 BASIC24.35■■□□□ 1.49
CUX2O14529 RNF7-205ENST00000480908 782 ntTSL 4 BASIC24.35■■□□□ 1.49
CUX2O14529 CETN3-205ENST00000522842 664 ntTSL 2 BASIC24.35■■□□□ 1.49
CUX2O14529 AC117834.1-201ENST00000523197 602 ntTSL 4 BASIC24.35■■□□□ 1.49
CUX2O14529 HNRNPA1P72-201ENST00000529511 967 ntBASIC24.35■■□□□ 1.49
CUX2O14529 KLF17P1-201ENST00000547105 1126 ntBASIC24.35■■□□□ 1.49
CUX2O14529 TROAP-213ENST00000550709 778 ntAPPRIS ALT2 TSL 2 BASIC24.35■■□□□ 1.49
CUX2O14529 AC134878.2-201ENST00000620700 1265 ntBASIC24.35■■□□□ 1.49
CUX2O14529 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC24.35■■□□□ 1.49
CUX2O14529 AC138761.4-201ENST00000578881 1514 ntTSL 3 BASIC24.35■■□□□ 1.49
CUX2O14529 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC24.35■■□□□ 1.49
CUX2O14529 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 FAM9B-201ENST00000327220 1340 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 OXGR1-204ENST00000543457 1305 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 SUV39H1-202ENST00000376687 2871 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CUX2O14529 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC24.34■■□□□ 1.49
CUX2O14529 AC009242.1-201ENST00000634300 2706 ntTSL 5 BASIC24.34■■□□□ 1.49
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms