Protein–RNA interactions for Protein: H7C350

CCDC188, Coiled-coil domain-containing protein 188, humanhuman

Predictions only

Length 402 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC188H7C350 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 RBFADN-204ENST00000568911 5187 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 PLEKHB2-205ENST00000409279 2488 ntAPPRIS ALT1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 FIBP-201ENST00000338369 1261 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC15.34■□□□□ 0.05
CCDC188H7C350 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 AC135586.1-201ENST00000539323 574 ntBASIC15.34■□□□□ 0.05
CCDC188H7C350 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC15.34■□□□□ 0.05
CCDC188H7C350 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 RRP7BP-205ENST00000566851 833 ntBASIC15.34■□□□□ 0.05
CCDC188H7C350 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC188H7C350 AC243964.2-202ENST00000591312 752 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC15.34■□□□□ 0.05
CCDC188H7C350 CLEC12A-AS1-201ENST00000420905 3956 ntTSL 2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 MAPT-215ENST00000574436 1326 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
CCDC188H7C350 PCTP-207ENST00000576183 2680 ntTSL 3 BASIC15.34■□□□□ 0.05
CCDC188H7C350 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 BCAN-201ENST00000329117 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 ZNF641-201ENST00000301042 4544 ntTSL 5 BASIC15.34■□□□□ 0.05
CCDC188H7C350 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC15.34■□□□□ 0.05
CCDC188H7C350 DAGLB-201ENST00000297056 2897 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 ZBP1-201ENST00000371173 2195 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
CCDC188H7C350 AL359075.1-201ENST00000476232 2921 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 KLHDC3-203ENST00000332245 1494 ntTSL 2 BASIC15.33■□□□□ 0.05
CCDC188H7C350 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 ARSH-201ENST00000381130 1875 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 CTCFL-210ENST00000481655 1512 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 LRRC59-203ENST00000576448 1531 ntBASIC15.33■□□□□ 0.05
CCDC188H7C350 PRMT3-202ENST00000331079 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 LINC01750-202ENST00000438293 3068 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
CCDC188H7C350 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 ITGB4-203ENST00000450894 5645 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC15.33■□□□□ 0.04
CCDC188H7C350 KIF17-203ENST00000400463 3731 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC188H7C350 AC134915.1-201ENST00000426461 574 ntBASIC15.33■□□□□ 0.04
CCDC188H7C350 LINC02558-202ENST00000436395 298 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC188H7C350 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC188H7C350 AP001582.1-201ENST00000525856 295 ntBASIC15.33■□□□□ 0.04
CCDC188H7C350 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC15.33■□□□□ 0.04
CCDC188H7C350 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC15.33■□□□□ 0.04
CCDC188H7C350 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 C12orf73-201ENST00000378090 1738 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 RET-205ENST00000615310 4337 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 ESPN-201ENST00000377828 3531 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC188H7C350 RFESD-201ENST00000311364 2722 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 TP73-207ENST00000378290 1831 ntTSL 2 BASIC15.33■□□□□ 0.04
CCDC188H7C350 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CCDC188H7C350 C7orf72-201ENST00000297001 2028 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 AMT-232ENST00000636199 1546 ntTSL 5 BASIC15.33■□□□□ 0.04
CCDC188H7C350 ARMCX3-203ENST00000471229 2051 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC15.32■□□□□ 0.04
CCDC188H7C350 RAB37-216ENST00000613645 1653 ntAPPRIS ALT1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 OSBPL3-201ENST00000313367 6760 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC15.32■□□□□ 0.04
CCDC188H7C350 SIGLEC6-201ENST00000343300 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.32■□□□□ 0.04
CCDC188H7C350 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC15.32■□□□□ 0.04
CCDC188H7C350 PPM1M-203ENST00000409502 1790 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CCDC188H7C350 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 49.5 ms