Protein–RNA interactions for Protein: A6NGU7

LINC01546, Putative uncharacterized protein encoded by LINC01546, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01546A6NGU7 MAMLD1-203ENST00000370401 4854 ntAPPRIS P3 TSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 NISCH-212ENST00000488380 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 GPBAR1-203ENST00000521462 1465 ntAPPRIS P1 TSL 2 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ESRRB-201ENST00000380887 2745 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AC018445.4-201ENST00000624066 2291 ntBASIC10.36□□□□□ -0.75
LINC01546A6NGU7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AC104758.3-203ENST00000562938 2123 ntBASIC10.36□□□□□ -0.75
LINC01546A6NGU7 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ELF4-201ENST00000308167 4165 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 PAX8-204ENST00000397647 3633 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 DRD5P1-201ENST00000456605 1438 ntBASIC10.36□□□□□ -0.75
LINC01546A6NGU7 EFEMP1-201ENST00000355426 1820 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 POTEB3-201ENST00000611217 1813 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 FKBP2-201ENST00000309366 657 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 BAX-203ENST00000354470 433 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 RAD18-204ENST00000418463 563 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 RAD18-205ENST00000421052 582 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 FAM58CP-201ENST00000435741 640 ntBASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AC022616.1-201ENST00000518688 554 ntBASIC10.36□□□□□ -0.75
LINC01546A6NGU7 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 CALM3-211ENST00000598871 561 ntTSL 4 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ACOT9-201ENST00000336430 1675 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 STRIP2-202ENST00000435494 2866 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ROCK1-201ENST00000399799 9484 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 EVC2-201ENST00000310917 4828 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ZNF70-201ENST00000341976 6924 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 GJB5-201ENST00000338513 1355 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 TRAIP-201ENST00000331456 2028 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 POU5F1B-201ENST00000465342 5360 ntAPPRIS P1 TSL 3 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 PCDH17-201ENST00000377918 8232 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
LINC01546A6NGU7 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 TUBB4AP1-201ENST00000450755 1325 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 GPA33-201ENST00000367868 2802 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SLC46A3-201ENST00000266943 3173 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 FLAD1-207ENST00000368433 2656 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 UBA6-202ENST00000420827 1664 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 OXA1L-203ENST00000412791 1440 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ATP6AP2-211ENST00000636196 1403 ntAPPRIS ALT2 TSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 EFCAB2-202ENST00000366522 6167 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 AC106818.1-201ENST00000623223 3242 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 FGD5-206ENST00000543601 5768 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 C11orf71-201ENST00000325636 652 ntAPPRIS P3 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SELENOF-203ENST00000401030 727 ntTSL 2 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 ARSEP1-201ENST00000420443 635 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 AC026410.3-201ENST00000514280 936 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 TUBB8P7-202ENST00000564451 2115 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 AC040169.1-201ENST00000565382 521 ntBASIC10.35□□□□□ -0.75
LINC01546A6NGU7 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 STXBP2-222ENST00000612033 1188 ntTSL 5 BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC10.35□□□□□ -0.75
LINC01546A6NGU7 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC10.35□□□□□ -0.75
Retrieved 100 of 98,524 protein–RNA pairs in 97.3 ms