Protein–RNA interactions for Protein: A6NEF3

GOLGA6L4, Golgin subfamily A member 6-like protein 4, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GOLGA6L4A6NEF3 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 AC009477.1-201ENST00000452936 217 ntBASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 PRR29-204ENST00000577953 565 ntTSL 4 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 ANKMY1-210ENST00000406958 2396 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 TOM1-201ENST00000382034 1300 ntTSL 5 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 MAD1L1-204ENST00000406869 2991 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 NMRAL1-201ENST00000283429 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 AL589669.1-201ENST00000639829 1506 ntTSL 5 BASIC17.11■□□□□ 0.33
GOLGA6L4A6NEF3 TP73-201ENST00000346387 4854 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 TMPRSS4-214ENST00000523251 1689 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 RPS6KA4-202ENST00000528057 3121 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 FAM90A1-203ENST00000538603 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 GRWD1-201ENST00000253237 5571 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 INPP5E-201ENST00000371712 3394 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 OR2V1-202ENST00000641318 2665 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 DPYSL4-201ENST00000338492 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 LINC00479-201ENST00000412102 2033 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 MFAP3-201ENST00000322602 2891 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AL357054.3-201ENST00000607084 2055 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 B9D2-201ENST00000243578 1027 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 FTH1-201ENST00000273550 1229 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AL096814.1-202ENST00000372963 647 ntAPPRIS P5 TSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AL139094.1-201ENST00000405549 1188 ntBASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 RN7SL399P-201ENST00000471648 279 ntBASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AC022616.1-201ENST00000518688 554 ntBASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 FTH1-202ENST00000526640 786 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 STOM-203ENST00000538954 1257 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 LINC01301-205ENST00000531654 1347 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 MYO15B-236ENST00000633867 6323 ntTSL 5 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 TLE1-203ENST00000376499 3893 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 ZBTB2-201ENST00000325144 3090 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 CLIP2-203ENST00000395060 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 STRA6-205ENST00000432245 1889 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
GOLGA6L4A6NEF3 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 TDRD5-201ENST00000294848 3525 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 TP73-205ENST00000378285 2117 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 WDFY2-203ENST00000612477 6932 ntTSL 2 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 GGT5-202ENST00000327365 2494 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 FLOT2-210ENST00000585169 2585 ntAPPRIS ALT1 TSL 5 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 MKNK1-204ENST00000371946 2719 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 HPCAL4-201ENST00000372844 4856 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 CHRNA3-201ENST00000326828 3202 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 TOM1L2-214ENST00000581396 5595 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 NR3C1-201ENST00000231509 3556 ntAPPRIS ALT1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 FAM19A3-202ENST00000369630 1282 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 FAM197Y5-201ENST00000423213 765 ntTSL 5 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 SPDYE18-201ENST00000510091 1050 ntBASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 TOMM5-205ENST00000544379 635 ntTSL 2 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 ARL6IP1-202ENST00000546206 1107 ntTSL 2 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC17.09■□□□□ 0.33
GOLGA6L4A6NEF3 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 35.9 ms