Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 TESMIN-204ENST00000443940 3495 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC12.85□□□□□ -0.35
SHISA3A0PJX4 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 PRPSAP1-206ENST00000446526 3660 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 ASB2-201ENST00000315988 2743 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 CD68-202ENST00000380498 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 TEX35-204ENST00000367642 2452 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL139400.1-201ENST00000366220 510 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 FCRLB-204ENST00000367946 1152 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 VAT1-202ENST00000420567 1069 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL589987.1-201ENST00000453380 819 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 YBX1P5-201ENST00000509441 847 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 RAB35-202ENST00000534951 939 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AC027243.1-201ENST00000559539 758 ntTSL 3 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AC005829.1-201ENST00000570002 483 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 MIR4469-201ENST00000583919 79 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL844908.2-201ENST00000609461 460 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL662799.1-202ENST00000614205 422 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL136531.2-202ENST00000617804 573 ntAPPRIS P1 TSL 4 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 CBY1-211ENST00000619293 1118 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 DIDO1-201ENST00000266070 8574 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 TANGO2-205ENST00000401886 1559 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 ACIN1-204ENST00000397341 2738 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 MARK2P9-201ENST00000430958 1727 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AC139712.1-201ENST00000378256 1875 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AL022313.4-201ENST00000562756 2046 ntBASIC12.84□□□□□ -0.35
SHISA3A0PJX4 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 KIZ-213ENST00000620891 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 EIF3CL-201ENST00000380876 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 C3-201ENST00000245907 5263 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 RAD51C-215ENST00000583539 1319 ntAPPRIS ALT2 TSL 2 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 DDX17-202ENST00000396821 4791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
SHISA3A0PJX4 PEG10-205ENST00000612748 2585 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 AC067750.1-201ENST00000608826 6545 ntBASIC12.83□□□□□ -0.35
SHISA3A0PJX4 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 BAIAP3-216ENST00000628027 4732 ntTSL 5 BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
SHISA3A0PJX4 MEST-206ENST00000416162 2158 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AC010255.3-203ENST00000509403 1727 ntAPPRIS P1 TSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 NFATC4-206ENST00000539237 5686 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 FOXM1-210ENST00000627656 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 ZNF397-201ENST00000261333 1419 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AP1B1-208ENST00000432560 4146 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 EIF3FP3-201ENST00000434851 1086 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 SLBP-205ENST00000488267 987 ntTSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AP000344.2-201ENST00000512987 629 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AL512356.2-201ENST00000546955 174 ntBASIC12.83□□□□□ -0.36
SHISA3A0PJX4 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AL162231.3-201ENST00000556278 902 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 TWSG1-202ENST00000581641 1119 ntTSL 2 BASIC12.83□□□□□ -0.36
SHISA3A0PJX4 AC004466.1-201ENST00000599515 1080 ntBASIC12.83□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms