Protein–RNA interactions for Protein: X5D2U9

HLA-DRB4, HLA class II histocompatibility antigen, DR beta 4 chain, humanhuman

Predictions only

Length 266 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB4X5D2U9 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 BAATP1-201ENST00000412284 1225 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 EIF3FP3-201ENST00000434851 1086 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SNHG11-212ENST00000449351 954 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC007389.4-201ENST00000454674 793 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 RN7SL692P-201ENST00000464677 288 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC015936.2-201ENST00000593177 259 ntBASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 TNFRSF11A-205ENST00000616710 3809 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC233723.1-201ENST00000635921 386 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 B3GNT7-201ENST00000287590 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AC138894.1-201ENST00000635887 2824 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 MYLK-201ENST00000346322 5892 ntAPPRIS ALT2 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 GPRASP1-203ENST00000444152 5809 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SH3BP5L-201ENST00000366472 3861 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 MCRS1-211ENST00000550165 1936 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SLC23A1-201ENST00000348729 2299 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 E2F7-202ENST00000416496 5297 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PLIN4-201ENST00000301286 6353 ntAPPRIS P2 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 BBS2-201ENST00000245157 2963 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 DMRT2-202ENST00000302441 1495 ntTSL 5 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SNPH-201ENST00000381867 5533 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
HLA-DRB4X5D2U9 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 RGS8-204ENST00000483095 1432 ntAPPRIS P1 TSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC023632.2-201ENST00000523011 1789 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 TMPRSS6-201ENST00000346753 3197 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AL356585.2-201ENST00000625078 2396 ntBASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ITGB8-201ENST00000222573 8751 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 MROH2A-201ENST00000389758 5355 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PPIL6-202ENST00000424445 4031 ntTSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 INTS4P1-203ENST00000641008 3683 ntBASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ARFIP1-202ENST00000356064 1302 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ENO3-206ENST00000519584 1322 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC134312.5-201ENST00000568031 1313 ntBASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ADAM11-201ENST00000200557 4571 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ZNRD1-201ENST00000332435 864 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 OR10H1-201ENST00000334920 1124 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 MGST3-203ENST00000367885 680 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 KDM4A-AS1-204ENST00000439057 686 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PRSS42-202ENST00000447340 1280 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AL355864.2-201ENST00000447420 863 ntBASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 LHX6-205ENST00000464484 666 ntTSL 2 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 HHEX-203ENST00000492654 808 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 NTN4-201ENST00000343702 3615 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 LGALSL-201ENST00000238875 3926 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 KIAA0895L-201ENST00000290881 3550 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PHTF1-204ENST00000369604 3273 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 KBTBD4-202ENST00000430070 2372 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 MAGI1-218ENST00000621418 6225 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 SNX20-202ENST00000330943 2904 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 MOB3C-203ENST00000371940 5725 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 UBE3B-201ENST00000340074 1448 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
HLA-DRB4X5D2U9 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Retrieved 100 of 98,524 protein–RNA pairs in 50.4 ms