Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RNF130-207ENST00000522208 9945 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AL391294.1-201ENST00000641352 4068 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ABR-202ENST00000302538 5289 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RABL2B-201ENST00000354869 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AP001258.1-201ENST00000501817 2110 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 FAM131A-203ENST00000383847 1483 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 TNRC6C-211ENST00000636222 7093 ntAPPRIS ALT2 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ATF4P4-201ENST00000393544 1930 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LILRP1-201ENST00000444199 1370 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LAMB1-203ENST00000393560 2806 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RPP25L-201ENST00000297613 1092 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 KRT16P4-201ENST00000453883 522 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AL353719.1-201ENST00000566847 864 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ARHGAP36-203ENST00000370922 2736 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 WIPF3-201ENST00000242140 4184 ntAPPRIS P2 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 PBX1-203ENST00000420696 6636 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 MYO9B-201ENST00000397274 7532 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LINC02473-201ENST00000569621 2195 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CACNA1G-232ENST00000515411 6960 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ANKRD36B-201ENST00000258459 5986 ntAPPRIS P1 TSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LINC-PINT-208ENST00000451786 3505 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 HNRNPDL-207ENST00000614627 3968 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CAMK2B-209ENST00000395749 4447 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RIC8B-213ENST00000638198 1611 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 GDPD2-205ENST00000538649 2067 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ESR1-201ENST00000206249 6458 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 DTL-201ENST00000366991 4573 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 KCTD21-AS1-207ENST00000600795 1549 ntBASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ILF3-202ENST00000407004 3671 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 ZFHX2-AS1-201ENST00000553985 2322 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CYYR1-201ENST00000299340 3101 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 C2orf69-201ENST00000319974 3728 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 CCT6P3-201ENST00000419314 3702 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01756-201ENST00000417651 2148 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 RNF41-202ENST00000394013 2452 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 MB21D1-201ENST00000370315 3182 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 DGKH-203ENST00000379274 4202 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 LINC01634-201ENST00000443243 2379 ntTSL 2 BASIC7.51□□□□□ -1.21
LINC01558Q9Y6Z2 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TESK2-202ENST00000372086 3074 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 LDLRAD3-201ENST00000315571 3798 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ARF3-201ENST00000256682 4105 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SLC44A3-206ENST00000527077 1943 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 IFT22-211ENST00000621899 2272 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AL357673.2-201ENST00000623663 4969 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TMEM123-202ENST00000398136 3579 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 PBOV1-201ENST00000527246 2506 ntAPPRIS P1 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 CTSA-202ENST00000354880 1820 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TNRC18-202ENST00000399434 1459 ntTSL 2 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TRPC7-203ENST00000502753 2424 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 ZSCAN5B-202ENST00000586855 2059 ntAPPRIS P1 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 YWHAB-201ENST00000353703 3049 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TUFT1-202ENST00000368848 3033 ntAPPRIS ALT2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MSTO2P-201ENST00000314835 1709 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 AC005154.3-201ENST00000419639 1393 ntBASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 SCAI-202ENST00000373549 1968 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MYO9A-202ENST00000424560 4008 ntTSL 5 BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 TUT1-202ENST00000308436 2826 ntAPPRIS P2 TSL 1 (best) BASIC7.5□□□□□ -1.21
LINC01558Q9Y6Z2 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms