Protein–RNA interactions for Protein: Q9UMS6

SYNPO2, Synaptopodin-2, humanhuman

Predictions only

Length 1,093 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2Q9UMS6 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 MRPL32-201ENST00000223324 1035 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 KRT17P5-201ENST00000332088 839 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 CITED1-202ENST00000373619 886 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 DCST1-AS1-201ENST00000452962 822 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 CHCHD2P9-201ENST00000461726 456 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 CFL1-214ENST00000534769 758 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 MIR4706-201ENST00000582134 82 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 TMEM205-210ENST00000588560 840 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AC138894.2-201ENST00000602838 371 ntBASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 PRSS45-202ENST00000620911 1041 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 NFAM1-201ENST00000329021 5602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 STARD7-201ENST00000337288 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 ADAMTS1-201ENST00000284984 5191 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 CBLN4-201ENST00000064571 3024 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 TBC1D8-202ENST00000409318 3803 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC16.74■□□□□ 0.27
SYNPO2Q9UMS6 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 COLCA2-202ENST00000526216 1332 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 CACFD1-206ENST00000540581 2880 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 LINC01815-202ENST00000641468 1409 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 CCT8L1P-201ENST00000465400 1674 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 TRIM45-203ENST00000369464 3495 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 ABAT-203ENST00000425191 1923 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 MRPS22-201ENST00000310776 1120 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 AL807761.2-201ENST00000422849 729 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 AL139420.2-201ENST00000449439 410 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 RPS2P36-201ENST00000456516 831 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 RN7SL81P-201ENST00000493781 261 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 DKKL1-202ENST00000594268 524 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 AC007326.1-201ENST00000604539 458 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 AC018635.2-201ENST00000608625 364 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 FER1L4-210ENST00000615531 5998 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 CECR7-202ENST00000441006 2726 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 FAH-201ENST00000261755 1471 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 BRAT1-201ENST00000340611 2915 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 BRD7P5-201ENST00000299197 1822 ntBASIC16.73■□□□□ 0.27
SYNPO2Q9UMS6 ELAVL3-201ENST00000359227 4729 ntAPPRIS P3 TSL 3 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SYNCRIP-202ENST00000369622 3023 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TCP10-210ENST00000617120 2182 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SHMT1P1-201ENST00000419974 1312 ntBASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 PRICKLE3-204ENST00000453382 1937 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 GFRA2-208ENST00000524240 4921 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 SPAG8-209ENST00000484764 1618 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 RPS9-204ENST00000391753 709 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 BAX-205ENST00000391871 687 ntTSL 5 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 UBXN7-AS1-201ENST00000442941 386 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 AC133961.1-201ENST00000503085 762 ntTSL 3 BASIC16.72■□□□□ 0.27
SYNPO2Q9UMS6 APOC1P1-201ENST00000507983 630 ntTSL 4 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 43.7 ms