Protein–RNA interactions for Protein: Q9NXB0

MKS1, Meckel syndrome type 1 protein, humanhuman

Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1Q9NXB0 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC14.55□□□□□ -0.08
MKS1Q9NXB0 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.55□□□□□ -0.08
MKS1Q9NXB0 PCDHA5-201ENST00000529619 4157 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
MKS1Q9NXB0 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
MKS1Q9NXB0 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 PBXIP1-202ENST00000368463 3212 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AP1G2-201ENST00000308724 3298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 NUTM2B-203ENST00000429828 3292 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 CCT2-201ENST00000299300 2041 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 TSPEAR-AS1-202ENST00000451035 2108 ntTSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 GDPD2-204ENST00000536730 2171 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AC244021.1-201ENST00000417218 3662 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 GORASP1-201ENST00000319283 3722 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 SEMA4B-201ENST00000332496 3781 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 TDRD6-201ENST00000316081 6817 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ARNTL-202ENST00000401424 2788 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ELAVL2-201ENST00000223951 3763 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 USP17L6P-201ENST00000382470 1197 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 MYCLP2-201ENST00000449268 967 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AC093004.1-201ENST00000508850 424 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 FADS2-205ENST00000517839 469 ntTSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AC136475.2-201ENST00000526612 392 ntTSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AL359711.2-201ENST00000563105 872 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 MIR8072-201ENST00000614241 80 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AC093028.1-201ENST00000622998 982 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 CLUHP2-201ENST00000426660 1303 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 PAX5-214ENST00000523241 1342 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 KRT8P28-201ENST00000433288 1390 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 LINC00665-206ENST00000590622 1749 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ELAVL4-207ENST00000448907 1951 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 AL022313.4-201ENST00000562756 2046 ntBASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 NR4A1-202ENST00000360284 2589 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 SH3TC2-202ENST00000502274 2681 ntTSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ZBTB20-215ENST00000481632 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 GPER1-203ENST00000397092 2971 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 SGK3-208ENST00000521198 3306 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
MKS1Q9NXB0 DIAPH2-202ENST00000355827 3782 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 TTLL4-212ENST00000457313 3723 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 STRA6-202ENST00000395105 2800 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PTPA-205ENST00000357197 2653 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 CPN1-201ENST00000370418 1863 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 MARK2P9-201ENST00000430958 1727 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 TRMO-203ENST00000375119 1647 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 NME1-209ENST00000511355 1645 ntTSL 5 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 IGDCC3-201ENST00000327987 4479 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 MLLT11-201ENST00000368921 4075 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 UPK2-201ENST00000264031 916 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SPDYE19P-201ENST00000338590 713 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 MRPS18AP1-201ENST00000414458 589 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC104596.2-201ENST00000512793 793 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 REEP4-207ENST00000523293 913 ntTSL 3 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 IL32-215ENST00000529550 772 ntAPPRIS P4 TSL 3 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AC093726.1-201ENST00000608064 963 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 AL390754.1-201ENST00000619088 582 ntBASIC14.53□□□□□ -0.08
MKS1Q9NXB0 KISS1-202ENST00000625357 435 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms