Protein–RNA interactions for Protein: Q9BXY4

RSPO3, R-spondin-3, humanhuman

Predicted RBP Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RSPO3Q9BXY4 PGBD2-202ENST00000355360 2879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 TMEM184B-202ENST00000361906 3611 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ANKRD30BP2-201ENST00000435744 1610 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC107918.4-201ENST00000641966 3141 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 L2HGDH-202ENST00000267436 6414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CTSW-201ENST00000307886 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AMT-201ENST00000273588 2280 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 TMBIM7P-202ENST00000641474 1516 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 KCNMA1-251ENST00000639090 4319 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC010247.2-201ENST00000559786 1955 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AGRP-201ENST00000290953 764 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 LINC01116-202ENST00000339037 838 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 RPF1-202ENST00000370656 724 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ADIRF-201ENST00000372013 917 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 MPV17-205ENST00000402310 906 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AL035633.1-201ENST00000406139 838 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 LIMS3-201ENST00000437679 1220 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CHMP1AP1-201ENST00000445563 662 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AP000552.1-208ENST00000452952 576 ntTSL 4 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC007389.4-201ENST00000454674 793 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 SNHG14-209ENST00000456576 544 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 RN7SL752P-201ENST00000463779 287 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AC027237.1-201ENST00000560942 655 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 AL596325.1-201ENST00000563991 1082 ntBASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ZNF790-AS1-204ENST00000589556 650 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 ATXN7L1-207ENST00000477775 2426 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 GRIK4-208ENST00000638419 3593 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 PML-203ENST00000354026 2885 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 NR1H3-221ENST00000481889 1704 ntTSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 WASHC2C-202ENST00000359860 4471 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CPT1A-202ENST00000376618 2635 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
RSPO3Q9BXY4 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 AC082651.4-201ENST00000483023 1852 ntTSL 5 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 LDB3-207ENST00000542786 1889 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 AL928654.5-201ENST00000624831 2501 ntBASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 ACOT7-203ENST00000377845 1432 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 AC005252.3-201ENST00000623855 2258 ntBASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 KATNB1-201ENST00000379661 2664 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 CDH16-204ENST00000565796 2694 ntTSL 2 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 OR3A2-205ENST00000641164 2033 ntAPPRIS P1 BASIC13.46□□□□□ -0.26
RSPO3Q9BXY4 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NUTM2A-202ENST00000381707 3290 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 GGT1-203ENST00000400382 2628 ntAPPRIS P1 TSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ANKS1B-208ENST00000547010 2595 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ZSCAN30-212ENST00000639929 1305 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ATP6V0A4-202ENST00000353492 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 CDC42SE2-202ENST00000395246 3485 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ZNRF3-202ENST00000406323 2878 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 COG5-203ENST00000393603 5418 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SEPT12-201ENST00000268231 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 AC006001.1-201ENST00000325130 474 ntBASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 CALY-203ENST00000368558 825 ntTSL 5 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.45□□□□□ -0.26
RSPO3Q9BXY4 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC13.45□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms