Protein–RNA interactions for Protein: Q9BWW4

SSBP3, Single-stranded DNA-binding protein 3, humanhuman

Predicted RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3Q9BWW4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AC100850.1-201ENST00000506768 649 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AC090502.1-202ENST00000515416 966 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AL008638.5-201ENST00000623814 1298 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 PRRC2B-210ENST00000638390 1084 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ZC3H14-204ENST00000336693 2007 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 HIPK4-201ENST00000291823 2452 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 AC091951.1-201ENST00000512854 2465 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 UNC13A-202ENST00000519716 9838 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 C8orf49-201ENST00000525043 1968 ntBASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 IGHA2-202ENST00000497872 1320 ntAPPRIS P5 TSL 1 (best) BASIC12.36□□□□□ -0.43
SSBP3Q9BWW4 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 FAM156A-206ENST00000612915 2233 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 PCNX4-203ENST00000406854 4666 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 FOXL1-201ENST00000320241 3655 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SNX11-202ENST00000393405 2733 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 PPM1A-203ENST00000395076 8184 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CICP23-201ENST00000605013 2741 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ADAMTS13-205ENST00000371916 4330 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CNNM2-203ENST00000433628 3857 ntAPPRIS ALT1 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ZNF655-212ENST00000424881 4666 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC007292.2-201ENST00000593524 1812 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 NELFA-202ENST00000382882 3343 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 FECH-202ENST00000382873 2526 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC009093.2-202ENST00000620513 2079 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 Z98752.1-201ENST00000442482 518 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AL157935.2-201ENST00000476274 1071 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC099548.2-209ENST00000480264 625 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 LILRA5-204ENST00000486742 1078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AP001258.2-201ENST00000529891 490 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC093525.1-201ENST00000569317 596 ntAPPRIS P1 TSL 3 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 KLK11-210ENST00000600362 759 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AL358472.3-201ENST00000608147 415 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 LINC02028-216ENST00000609015 732 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 GPR182-203ENST00000622922 591 ntBASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SLC52A3-201ENST00000217254 2654 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 KCNT1-209ENST00000490355 3708 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 NMUR1-201ENST00000305141 3298 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 RTP1-201ENST00000312295 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 FMR1-203ENST00000370470 1774 ntTSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CDKN2AIP-201ENST00000302350 2646 ntTSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 ANKLE1-201ENST00000394458 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 RNF32-202ENST00000317955 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AL928654.2-201ENST00000551271 2279 ntTSL 3 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 PCDH10-203ENST00000618019 4574 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 SPIN2A-201ENST00000374906 1319 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CERS6-202ENST00000392687 6851 ntAPPRIS ALT1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 MBD1-211ENST00000585595 2179 ntAPPRIS ALT2 TSL 2 BASIC12.35□□□□□ -0.43
SSBP3Q9BWW4 PRICKLE1-201ENST00000345127 5902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms