Protein–RNA interactions for Protein: Q99616

CCL13, C-C motif chemokine 13, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL13Q99616 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 IKZF1-205ENST00000357364 5925 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 IL17RA-201ENST00000319363 8607 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 SERINC2-206ENST00000536859 2072 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 BST2-201ENST00000252593 1019 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 IGLV2-23-201ENST00000390306 502 ntAPPRIS P1 BASIC12.38□□□□□ -0.43
CCL13Q99616 MDP1-202ENST00000396833 582 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 NREP-204ENST00000419114 704 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 CHMP1AP1-201ENST00000445563 662 ntBASIC12.38□□□□□ -0.43
CCL13Q99616 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL13Q99616 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC12.38□□□□□ -0.43
CCL13Q99616 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 AP000911.1-202ENST00000532706 543 ntTSL 4 BASIC12.38□□□□□ -0.43
CCL13Q99616 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC12.38□□□□□ -0.43
CCL13Q99616 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL13Q99616 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC12.38□□□□□ -0.43
CCL13Q99616 AL358472.3-201ENST00000608147 415 ntBASIC12.38□□□□□ -0.43
CCL13Q99616 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 ZNF618-201ENST00000288466 9109 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.38□□□□□ -0.43
CCL13Q99616 MBD6-201ENST00000355673 4282 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 KDR-201ENST00000263923 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 TNFSF13-201ENST00000338784 1971 ntAPPRIS P3 TSL 1 (best) BASIC12.38□□□□□ -0.43
CCL13Q99616 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC12.38□□□□□ -0.43
CCL13Q99616 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC12.38□□□□□ -0.43
CCL13Q99616 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 STYXL1-201ENST00000248600 1415 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 AC015688.4-201ENST00000580780 1647 ntBASIC12.37□□□□□ -0.43
CCL13Q99616 POLRMT-202ENST00000588649 3835 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 FUK-202ENST00000378912 3925 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 AL023775.1-201ENST00000454907 1746 ntBASIC12.37□□□□□ -0.43
CCL13Q99616 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CASC2-203ENST00000435944 3270 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CDK16-211ENST00000518022 2022 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 DLGAP1-204ENST00000400149 5203 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 LINC00476-204ENST00000429781 2825 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 EDN2-201ENST00000372587 1241 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 TCEAL1-203ENST00000372626 721 ntAPPRIS P1 TSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 MS4A13-201ENST00000378185 808 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 RNA5SP412-201ENST00000516234 123 ntBASIC12.37□□□□□ -0.43
CCL13Q99616 AL163974.1-201ENST00000554540 466 ntTSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 DUX4L45-201ENST00000566406 1057 ntBASIC12.37□□□□□ -0.43
CCL13Q99616 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 ANKS3-227ENST00000592711 580 ntTSL 4 BASIC12.37□□□□□ -0.43
CCL13Q99616 STXBP2-221ENST00000602355 716 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 BX088702.1-201ENST00000610784 235 ntBASIC12.37□□□□□ -0.43
CCL13Q99616 SRRD-201ENST00000215917 4020 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 COL9A1-204ENST00000370496 1372 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 AC010547.4-201ENST00000561754 1378 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 TTC7A-202ENST00000394850 4306 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 SCLY-202ENST00000409736 1774 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 ZNF563-201ENST00000293725 2754 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 TLN1-201ENST00000314888 8823 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CDH23-201ENST00000224721 11139 ntAPPRIS P5 TSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 CDH23-214ENST00000622827 11122 ntAPPRIS ALT1 TSL 5 BASIC12.37□□□□□ -0.43
CCL13Q99616 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC12.37□□□□□ -0.43
CCL13Q99616 TEX264-205ENST00000416589 1313 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 FGD5-AS1-202ENST00000424349 3792 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
CCL13Q99616 MEN1-207ENST00000377326 3150 ntAPPRIS ALT1 TSL 5 BASIC12.36□□□□□ -0.43
CCL13Q99616 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 LINC00924-202ENST00000556053 2682 ntTSL 2 BASIC12.36□□□□□ -0.43
CCL13Q99616 CHRNA7-201ENST00000306901 6181 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
CCL13Q99616 TRIM71-201ENST00000383763 8685 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms