Protein–RNA interactions for Protein: Q96SN8

CDK5RAP2, CDK5 regulatory subunit-associated protein 2, humanhuman

Predictions only

Length 1,893 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP2Q96SN8 AC105254.1-201ENST00000507782 621 ntTSL 4 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 CRADD-205ENST00000548483 1056 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 KRT8P2-201ENST00000556193 944 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 NUDT4P2-201ENST00000578341 546 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 RPL19-207ENST00000582193 792 ntAPPRIS ALT1 TSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 LINC01224-201ENST00000593573 798 ntTSL 4 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 SIGLEC22P-201ENST00000599104 714 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 SIGLEC22P-202ENST00000602065 544 ntTSL 4 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 AL021707.6-201ENST00000609212 491 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 MIR7845-201ENST00000618396 99 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 CCHCR1-201ENST00000376266 2625 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 AL353803.2-201ENST00000436510 1846 ntTSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 AL022313.4-201ENST00000562756 2046 ntBASIC16.92■□□□□ 0.3
CDK5RAP2Q96SN8 TEKT4P2-202ENST00000559466 1312 ntBASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 CICP16-201ENST00000502609 2813 ntBASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 FUNDC2P2-201ENST00000331369 1223 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 CELP-201ENST00000411440 1249 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 AL137058.1-201ENST00000418237 673 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 DPY19L2P5-201ENST00000456300 331 ntBASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 AC026410.1-201ENST00000507366 1101 ntBASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 SPINT2-204ENST00000587090 1246 ntAPPRIS ALT2 TSL 3 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 ASNA1-205ENST00000611688 1214 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 AC087392.5-201ENST00000612517 489 ntBASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PVR-202ENST00000344956 3166 ntAPPRIS ALT2 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 MPPED1-202ENST00000417669 3657 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 MAEA-207ENST00000505177 1340 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PGRMC1-201ENST00000217971 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 BMI1-201ENST00000376663 3428 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 OSBPL5-202ENST00000348039 2798 ntTSL 2 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 SLC6A2-205ENST00000566163 1759 ntTSL 5 BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 PDE4C-204ENST00000539010 1699 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
CDK5RAP2Q96SN8 ADD1-201ENST00000264758 4045 ntAPPRIS P3 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ARMC12-203ENST00000373869 1111 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ACYP2-204ENST00000422521 1115 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 MIR4649-201ENST00000582839 64 ntBASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 RETN-203ENST00000629642 400 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 MIDN-201ENST00000300952 3790 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 CSF2RA-219ENST00000501036 1622 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ATP2B1-AS1-201ENST00000605386 3632 ntBASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 METTL7B-201ENST00000394252 1506 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ADI1-201ENST00000327435 2391 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AP3M2-201ENST00000174653 3661 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 CALR3-201ENST00000269881 1292 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 SF3B1-204ENST00000414963 651 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ASGR2-203ENST00000446679 879 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AL355803.1-201ENST00000455524 188 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AP000842.2-201ENST00000533033 517 ntTSL 4 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 CRTC3-AS1-202ENST00000559531 657 ntTSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 NT5C-204ENST00000578337 582 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 GMFG-209ENST00000600322 622 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 TMIGD2-204ENST00000600349 333 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 RRM1-214ENST00000534285 2075 ntTSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 SOCS2-212ENST00000622746 2881 ntAPPRIS P1 TSL 3 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ARHGAP23-222ENST00000622683 5964 ntAPPRIS P2 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC16.9■□□□□ 0.3
CDK5RAP2Q96SN8 ASIC4-202ENST00000358078 2741 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.3
CDK5RAP2Q96SN8 ADD3-202ENST00000356080 3081 ntAPPRIS P4 TSL 1 (best) BASIC16.89■□□□□ 0.3
CDK5RAP2Q96SN8 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 62.9 ms