Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 CMC2-214ENST00000565925 640 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 CMIP-208ENST00000566462 3512 ntTSL 4 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 PRKN-208ENST00000610470 531 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 MAGEA2-203ENST00000611557 2024 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 PRKN-209ENST00000612485 225 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AL031008.1-201ENST00000619963 541 ntBASIC13.94□□□□□ -0.18
NR1H4Q96RI1 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 LIN28B-AS1-205ENST00000637414 879 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 VPS51-217ENST00000639871 243 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TRAK1-201ENST00000327628 5293 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 DNAJC13-201ENST00000260818 7730 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ACSL6-201ENST00000296869 2561 ntTSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 KCNJ9-201ENST00000368088 4170 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 COASY-211ENST00000590958 1976 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TBX6-202ENST00000395224 1803 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 POPDC2-201ENST00000264231 1679 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 UBE2I-204ENST00000397515 3109 ntAPPRIS P1 TSL 3 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ZNF568-206ENST00000455427 2378 ntTSL 2 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 WDFY1-201ENST00000233055 4660 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 SCN8A-202ENST00000355133 5820 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 NAA15-202ENST00000398947 6072 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
NR1H4Q96RI1 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 GSN-209ENST00000449733 2702 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AC012531.1-201ENST00000562848 2680 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AC009474.1-201ENST00000455096 1565 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 UNC13B-202ENST00000378496 5063 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 YWHAE-208ENST00000571732 1818 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 TM2D1-201ENST00000294613 1250 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 TM2D1-204ENST00000371180 1248 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 CRYGEP-201ENST00000412192 528 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AL031284.1-201ENST00000419297 478 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AC098831.1-202ENST00000438821 336 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AC093909.1-201ENST00000504731 1122 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 REEP2-206ENST00000506158 1021 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 HDAC2-AS2-213ENST00000520891 603 ntTSL 4 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AL009183.1-201ENST00000603760 355 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 TM2D1-212ENST00000606498 969 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 MAGI1-217ENST00000611645 6398 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 MIR6074-201ENST00000612054 107 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AL355974.2-201ENST00000614099 556 ntTSL 4 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AL355974.2-202ENST00000617298 936 ntTSL 3 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 CKM-201ENST00000221476 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 MAP3K4-203ENST00000366920 5445 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 HSPA8P5-201ENST00000456928 2069 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PRKAR1A-203ENST00000392711 4327 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 WDR45-234ENST00000634838 1545 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 CDC20B-203ENST00000381375 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 OR2I1P-208ENST00000641137 4948 ntBASIC13.93□□□□□ -0.18
NR1H4Q96RI1 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 PRAM1-201ENST00000423345 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 ATG4C-201ENST00000317868 2938 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 IL11RA-208ENST00000555003 3008 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 HPSE-207ENST00000513463 1458 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 HERC5-201ENST00000264350 3513 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 DAB2IP-202ENST00000309989 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
NR1H4Q96RI1 DIRAS3-201ENST00000370981 1973 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms