Protein–RNA interactions for Protein: Q96MF7

NSMCE2, E3 SUMO-protein ligase NSE2, humanhuman

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE2Q96MF7 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 C19orf66-202ENST00000397881 2140 ntAPPRIS ALT2 TSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 NUS1P3-201ENST00000423502 862 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 PPP6R2P1-201ENST00000450880 1275 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 YBX1P5-201ENST00000509441 847 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 POLD2P1-201ENST00000511220 997 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AL512356.2-201ENST00000546955 174 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC044860.1-202ENST00000559481 777 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC010624.2-201ENST00000600998 575 ntTSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC107373.2-201ENST00000607735 490 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ABCC6P1-201ENST00000546162 2943 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 MFSD2B-201ENST00000338315 2850 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SALL4P5-201ENST00000419001 1760 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 APOBEC3A-202ENST00000402255 1478 ntAPPRIS P1 TSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 PELP1-202ENST00000436683 3524 ntTSL 2 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 AP4B1-201ENST00000256658 2742 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 DRD5P1-201ENST00000456605 1438 ntBASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 SIRT2-202ENST00000358931 1912 ntTSL 5 BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
NSMCE2Q96MF7 BRINP1-202ENST00000373964 1641 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 GPR132-202ENST00000392585 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 CLCNKA-202ENST00000375692 2581 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 KIF6-201ENST00000229913 1330 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 EMILIN1-201ENST00000380320 3943 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 LARP4-201ENST00000293618 6296 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 SLC35E2B-205ENST00000617444 6283 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 JMJD6-208ENST00000617192 5517 ntTSL 5 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AC008125.1-201ENST00000548488 1538 ntTSL 5 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AL512306.2-201ENST00000444037 2219 ntTSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 RETN-202ENST00000381324 249 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AL121832.1-203ENST00000433121 475 ntTSL 3 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 LINC00899-202ENST00000444890 493 ntTSL 3 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 DNAJB3-201ENST00000446806 729 ntBASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 FAU-205ENST00000527548 538 ntAPPRIS P1 TSL 5 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 5S_rRNA.22-201ENST00000614916 106 ntBASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 BEAN1-201ENST00000299694 2160 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 CALHM1-201ENST00000329905 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 FOS-202ENST00000535987 1402 ntTSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 TP73-213ENST00000604479 1623 ntTSL 5 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 MAP3K3-203ENST00000577395 2016 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC13.97□□□□□ -0.17
NSMCE2Q96MF7 LINC00910-206ENST00000592135 2438 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 FARP2-201ENST00000264042 4051 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 DEPDC7-201ENST00000241051 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 AL356585.2-201ENST00000625078 2396 ntBASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 IL13RA1-202ENST00000371666 4036 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 CC2D1B-201ENST00000284376 3377 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 GLYCTK-207ENST00000477382 1304 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 KRT8P35-201ENST00000483942 1338 ntBASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 IFNA6-202ENST00000380210 1544 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 HPD-204ENST00000543163 1709 ntTSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 RANGRF-203ENST00000439238 1140 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 OTUD4-201ENST00000447906 3829 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 AC069262.1-201ENST00000539058 672 ntBASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 FAM227B-204ENST00000558594 1139 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
NSMCE2Q96MF7 DUX4L47-201ENST00000566374 394 ntBASIC13.96□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 65.3 ms