Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 CLN5-208ENST00000636183 6664 ntAPPRIS P2 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.85■□□□□ 0.13
SNX27Q96L92 MFNG-202ENST00000416983 2034 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX27Q96L92 UBAP1-201ENST00000297661 2735 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 TNRC18P2-201ENST00000417666 2714 ntBASIC15.85■□□□□ 0.13
SNX27Q96L92 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
SNX27Q96L92 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC15.85■□□□□ 0.13
SNX27Q96L92 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX27Q96L92 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX27Q96L92 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
SNX27Q96L92 PAK1-201ENST00000278568 2543 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX27Q96L92 UBAC2-202ENST00000376440 2525 ntTSL 2 BASIC15.85■□□□□ 0.13
SNX27Q96L92 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 GLIPR1L2-204ENST00000550916 2609 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 MRI1-202ENST00000319545 3027 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 UBE2D1-201ENST00000373910 2659 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 NR2E3-203ENST00000621098 2064 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 RIMS1-210ENST00000491071 5047 ntTSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 SSR4-203ENST00000370086 643 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 SLC25A27-201ENST00000371347 2963 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 NRM-202ENST00000376420 1228 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 AC004540.1-204ENST00000449537 727 ntTSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AC011773.1-201ENST00000520129 468 ntTSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 IGHVIII-5-2-201ENST00000522505 261 ntBASIC15.84■□□□□ 0.13
SNX27Q96L92 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AL135838.1-202ENST00000556411 441 ntTSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 RN7SL774P-201ENST00000577467 290 ntBASIC15.84■□□□□ 0.13
SNX27Q96L92 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AC091544.8-201ENST00000619490 361 ntBASIC15.84■□□□□ 0.13
SNX27Q96L92 CU633904.3-201ENST00000624042 1029 ntBASIC15.84■□□□□ 0.13
SNX27Q96L92 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 PDYN-AS1-201ENST00000446562 1802 ntTSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 DNAJA1-201ENST00000330899 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 SGCE-204ENST00000428696 1409 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC15.84■□□□□ 0.13
SNX27Q96L92 WDR81-202ENST00000409644 6733 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
SNX27Q96L92 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC15.84■□□□□ 0.13
SNX27Q96L92 AC104581.4-201ENST00000623126 3052 ntBASIC15.83■□□□□ 0.13
SNX27Q96L92 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.83■□□□□ 0.13
SNX27Q96L92 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC15.83■□□□□ 0.13
SNX27Q96L92 AC073082.1-201ENST00000602369 2103 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.13
SNX27Q96L92 ZNF79-202ENST00000543471 2194 ntTSL 2 BASIC15.83■□□□□ 0.13
SNX27Q96L92 ZNF79-203ENST00000612342 2192 ntTSL 2 BASIC15.83■□□□□ 0.13
SNX27Q96L92 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
SNX27Q96L92 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
SNX27Q96L92 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.13
SNX27Q96L92 TPO-203ENST00000346956 2923 ntTSL 5 BASIC15.83■□□□□ 0.12
SNX27Q96L92 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 ACVR1B-206ENST00000542485 2362 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.83■□□□□ 0.12
SNX27Q96L92 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 KRTAP20-4-201ENST00000382828 224 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SNX27Q96L92 MIR769-201ENST00000390225 118 ntBASIC15.83■□□□□ 0.12
SNX27Q96L92 IGLC7-201ENST00000390331 441 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SNX27Q96L92 IGHV3-13-201ENST00000390602 430 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SNX27Q96L92 KRT18P36-201ENST00000411618 1276 ntBASIC15.83■□□□□ 0.12
SNX27Q96L92 AC097103.2-201ENST00000504670 602 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC15.83■□□□□ 0.12
SNX27Q96L92 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 AC023824.4-202ENST00000569557 849 ntTSL 3 BASIC15.83■□□□□ 0.12
SNX27Q96L92 PAM16-211ENST00000575848 518 ntTSL 3 BASIC15.83■□□□□ 0.12
SNX27Q96L92 PAM16-214ENST00000576217 493 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
SNX27Q96L92 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 SYN1-201ENST00000295987 3299 ntAPPRIS P3 TSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 LMNA-213ENST00000473598 2015 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 COLEC11-201ENST00000236693 1381 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 ZNF815P-201ENST00000421890 1352 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC15.83■□□□□ 0.12
SNX27Q96L92 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC15.83■□□□□ 0.12
SNX27Q96L92 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
SNX27Q96L92 ASGR1-201ENST00000269299 1504 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 ATG5-201ENST00000343245 3092 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 ADAMTSL1-204ENST00000380545 1562 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
SNX27Q96L92 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms