Protein–RNA interactions for Protein: Q92902

HPS1, Hermansky-Pudlak syndrome 1 protein, humanhuman

Predictions only

Length 700 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1Q92902 MPRIP-202ENST00000341712 3846 ntAPPRIS P3 TSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 DGKD-201ENST00000264057 6297 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 MAGED4B-211ENST00000497164 2482 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 TBC1D8-AS1-201ENST00000610202 2478 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 FBLIM1-203ENST00000375771 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 TAF11-201ENST00000361288 1580 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PNMA1-201ENST00000316836 2590 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC020658.7-201ENST00000624274 2442 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 RNLS-201ENST00000331772 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 TOM1L2-209ENST00000540946 1420 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 STRN-202ENST00000379213 2254 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 NSUN5-203ENST00000428206 2269 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 GPHB5-201ENST00000314140 393 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 WFDC3-204ENST00000372632 704 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 HNRNPA3P1-201ENST00000401429 1139 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 GOLGA6L11P-201ENST00000417252 1298 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 CRB3P1-201ENST00000449338 276 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 HNRNPA3P5-201ENST00000455201 833 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 AL627443.1-201ENST00000456477 1035 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 PTPRVP-202ENST00000490575 953 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 SATB1-217ENST00000493952 626 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC027701.1-202ENST00000520988 459 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.68□□□□□ -0.22
HPS1Q92902 MAPKAPK5-203ENST00000547305 494 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 FKBP11-208ENST00000550765 1030 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 AL031717.1-201ENST00000569670 565 ntTSL 4 BASIC13.68□□□□□ -0.22
HPS1Q92902 NDUFAB1-205ENST00000570319 885 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PAM16-215ENST00000577031 548 ntTSL 4 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC116003.1-201ENST00000578340 536 ntTSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC061975.2-201ENST00000581722 295 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 AC005972.3-201ENST00000606304 481 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC13.68□□□□□ -0.22
HPS1Q92902 SPDYE12P-201ENST00000618416 771 ntBASIC13.68□□□□□ -0.22
HPS1Q92902 MKL1-202ENST00000396617 4505 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PDIA4-201ENST00000286091 2903 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 FHL2-205ENST00000393353 1531 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
HPS1Q92902 TJAP1-208ENST00000438588 2716 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC058822.1-201ENST00000507166 2550 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 AC009802.1-201ENST00000637973 1609 ntTSL 5 BASIC13.68□□□□□ -0.22
HPS1Q92902 TPO-205ENST00000382201 2956 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC13.68□□□□□ -0.22
HPS1Q92902 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC13.68□□□□□ -0.22
HPS1Q92902 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
HPS1Q92902 CREB3L4-202ENST00000368600 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 RDM1-227ENST00000619876 1491 ntAPPRIS ALT2 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 EIF1B-AS1-206ENST00000631175 1303 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SMIM14-201ENST00000295958 6483 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 FAM201A-201ENST00000377680 3437 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 MYADM-201ENST00000336967 3047 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 CCDC57-202ENST00000389641 3000 ntAPPRIS ALT2 TSL 5 BASIC13.67□□□□□ -0.22
HPS1Q92902 CCDC57-206ENST00000392347 3000 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 MROH2A-208ENST00000610772 5324 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
HPS1Q92902 RRAGB-202ENST00000374941 2061 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 PRMT7-203ENST00000449359 2091 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC13.67□□□□□ -0.22
HPS1Q92902 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 ALX4-201ENST00000329255 5750 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 CRY2-202ENST00000443527 4203 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 C15orf39-207ENST00000567617 4249 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 CETN4P-206ENST00000642099 2168 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 APBB2-211ENST00000506352 3316 ntAPPRIS ALT1 TSL 5 BASIC13.67□□□□□ -0.22
HPS1Q92902 ADAMTS5-201ENST00000284987 9056 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 JTB-201ENST00000271843 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 LCE3E-201ENST00000368789 611 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
HPS1Q92902 LINC00475-203ENST00000417983 703 ntTSL 2 BASIC13.67□□□□□ -0.22
HPS1Q92902 TSSK5P-201ENST00000423978 907 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 GAPDHP21-201ENST00000450301 1010 ntBASIC13.67□□□□□ -0.22
HPS1Q92902 AL139010.1-201ENST00000454878 894 ntBASIC13.67□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 77.3 ms