Protein–RNA interactions for Protein: Q8NE35

CPEB3, Cytoplasmic polyadenylation element-binding protein 3, humanhuman

Known RBP Predictions only

Length 698 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPEB3Q8NE35 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AMT-204ENST00000427987 1646 ntTSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 FAM45BP-202ENST00000592932 1624 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AL136172.1-201ENST00000598590 1394 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PCM1-201ENST00000325083 6820 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 TPM3-208ENST00000341485 2063 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 VILL-202ENST00000383759 2787 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AHCYP2-201ENST00000430630 1300 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 MRPL37P1-201ENST00000592451 1337 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PLAT-205ENST00000519510 2030 ntTSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 HNRNPUL1-201ENST00000263367 2952 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 SV2A-201ENST00000369145 2903 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 SNX21-203ENST00000372541 771 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 CRIP1-202ENST00000392531 485 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PEMT-203ENST00000395782 895 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 MPV17-206ENST00000402722 827 ntTSL 3 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PFN2-215ENST00000497148 743 ntTSL 4 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 COX5BP1-201ENST00000507622 393 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 IGHV3-71-201ENST00000523324 359 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 ZNF720-210ENST00000534369 791 ntTSL 3 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 VPS18-202ENST00000558474 873 ntTSL 3 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 RN7SL713P-201ENST00000582127 302 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AC073413.1-201ENST00000603927 732 ntBASIC12.95□□□□□ -0.34
CPEB3Q8NE35 HIST1H3I-201ENST00000616365 411 ntAPPRIS P1 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 NRG2-209ENST00000541337 3723 ntTSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 STAG3L2-201ENST00000426587 2130 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 FBXO42-201ENST00000375592 6202 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 KREMEN1-201ENST00000327813 2719 ntAPPRIS P3 TSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 ZNF385A-205ENST00000546970 2494 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
CPEB3Q8NE35 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 FLNA-207ENST00000422373 8486 ntAPPRIS P3 TSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 ZPBP2-202ENST00000377940 2177 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 LIN9-201ENST00000328205 3567 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 LINC00926-202ENST00000502027 2141 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 FAM163A-201ENST00000341785 2909 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 CYTH1-201ENST00000361101 3311 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 CYTH1-202ENST00000446868 3311 ntAPPRIS ALT1 TSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 HOXA-AS2-202ENST00000517635 2455 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 RNPS1-216ENST00000565678 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 CCDC121-202ENST00000394775 1472 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 FLT3LG-201ENST00000204637 1046 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC011450.1-202ENST00000358234 573 ntTSL 4 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MTHFSD-202ENST00000381214 1210 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 SUMF2-205ENST00000413756 1171 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC004945.1-201ENST00000416738 983 ntBASIC12.94□□□□□ -0.34
CPEB3Q8NE35 LARGE-AS1-202ENST00000424291 1065 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AL357497.1-201ENST00000436249 666 ntTSL 3 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC103563.7-201ENST00000448734 478 ntTSL 3 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MAATS1-203ENST00000463700 939 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC104989.1-201ENST00000519711 778 ntBASIC12.94□□□□□ -0.34
CPEB3Q8NE35 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC027601.2-201ENST00000571085 805 ntTSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MIR4683-201ENST00000579659 81 ntBASIC12.94□□□□□ -0.34
CPEB3Q8NE35 BX088702.1-201ENST00000610784 235 ntBASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 SCFD2-201ENST00000388940 2221 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 AC007191.1-201ENST00000623179 2995 ntBASIC12.94□□□□□ -0.34
CPEB3Q8NE35 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 DNAI1-209ENST00000614641 2598 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
CPEB3Q8NE35 STARD8-202ENST00000374597 4820 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms