Protein–RNA interactions for Protein: Q8IWZ4

TRIM48, Tripartite motif-containing protein 48, humanhuman

Predictions only

Length 208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM48Q8IWZ4 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 MTMR9-201ENST00000221086 7481 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
TRIM48Q8IWZ4 ZBED1P1-201ENST00000502364 1930 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ALPL-207ENST00000540617 2131 ntAPPRIS ALT2 TSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 HIF3A-218ENST00000600383 2101 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 GALNT4-201ENST00000529983 5399 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ACAP2-201ENST00000326793 7160 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SRSF8-201ENST00000587424 4028 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RTEL1-203ENST00000360203 4623 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SUPT20H-212ENST00000475892 2836 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SERF2-209ENST00000409646 559 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 LINC01694-201ENST00000424569 821 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 CHMP1AP1-201ENST00000445563 662 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 HSPB1P2-201ENST00000448722 546 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RPL35A-205ENST00000448864 549 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AL591846.1-201ENST00000451736 433 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC099548.2-209ENST00000480264 625 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RNF41-210ENST00000552244 716 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 GPR182-203ENST00000622922 591 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AL138725.1-201ENST00000407347 1314 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 FGF7P3-202ENST00000640245 1707 ntTSL 4 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SLC6A13-203ENST00000445055 1950 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 PAPPA-201ENST00000328252 10959 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 KIAA0319-204ENST00000537886 6622 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 RSPH6A-202ENST00000597055 2306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 AC091951.1-201ENST00000512854 2465 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 MIER1-208ENST00000401041 2552 ntTSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 CICP24-201ENST00000605464 2705 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 CICP14-201ENST00000629111 2732 ntBASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SLC4A8-204ENST00000514353 3041 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 SIX4-201ENST00000216513 6285 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TRIM48Q8IWZ4 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 COL7A1-201ENST00000328333 9276 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 CLPTM1-202ENST00000541297 2732 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 LRCH3-206ENST00000438796 7394 ntAPPRIS P5 TSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 FUT3-209ENST00000589918 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 INE2-201ENST00000630399 1874 ntBASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 ZNF286A-218ENST00000583566 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 BAIAP3-202ENST00000397488 4583 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC138028.2-202ENST00000567968 4528 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SNAP47-203ENST00000366760 1446 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 PTPA-218ENST00000435132 618 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AC006033.1-201ENST00000440505 426 ntBASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 APOA2-204ENST00000464492 530 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 AP001258.2-201ENST00000529891 490 ntBASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC14.53□□□□□ -0.08
TRIM48Q8IWZ4 EMC4-209ENST00000559421 497 ntTSL 2 BASIC14.53□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms