Protein–RNA interactions for Protein: Q8IWA6

CCDC60, Coiled-coil domain-containing protein 60, humanhuman

Predicted RBP Predictions only

Length 550 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60Q8IWA6 AC011474.2-201ENST00000579268 543 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 ZNF772-207ENST00000601768 482 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 LINC00926-201ENST00000501726 2530 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 ALK-201ENST00000389048 6220 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 AC013472.1-203ENST00000380387 1966 ntTSL 4 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 MVK-214ENST00000629016 1591 ntTSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 SLC25A37-206ENST00000519973 4823 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 GDAP1L1-207ENST00000612599 2585 ntTSL 3 BASIC16.29■□□□□ 0.2
CCDC60Q8IWA6 RNF166-210ENST00000568683 1768 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 MYADML-201ENST00000474610 2147 ntBASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 AGGF1P1-201ENST00000509500 2073 ntBASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 LCMT1-203ENST00000399069 1368 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 PPP2R5D-208ENST00000485511 3044 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ILF2-201ENST00000361891 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 DISC1-209ENST00000439617 7059 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 OR1J1-201ENST00000259357 969 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 KRTAP19-5-201ENST00000334151 461 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 TEX33-202ENST00000402860 986 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 AC012506.3-201ENST00000415245 892 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 FKBP11-202ENST00000444214 630 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 BANF1-202ENST00000445560 946 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 AC005234.1-201ENST00000457851 434 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 MANEAL-204ENST00000525897 1294 ntTSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 MEG3_2.1-201ENST00000611456 105 ntBASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 ZNF804B-201ENST00000333190 4659 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 FURIN-207ENST00000618099 4345 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 THUMPD3-AS1-212ENST00000520447 1809 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 SPRY4-202ENST00000434127 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 GRID2IP-202ENST00000452113 3428 ntTSL 5 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC16.28■□□□□ 0.2
CCDC60Q8IWA6 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 HTR7-201ENST00000277874 3028 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 CELF4-223ENST00000603232 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 OSBPL5-210ENST00000525498 2733 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 DLK1-201ENST00000331224 1324 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 FAM160B1-202ENST00000369248 5810 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 THOC6-201ENST00000253952 1246 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 AC239868.1-201ENST00000369385 493 ntBASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 AC079807.2-203ENST00000417692 656 ntTSL 2 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 APOL3-207ENST00000424878 1240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 ST13P19-201ENST00000442505 1124 ntBASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 RN7SL769P-201ENST00000469386 295 ntBASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 PGAM1P5-201ENST00000548011 764 ntBASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 ACP7-202ENST00000594229 1149 ntTSL 5 BASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 AC020922.3-201ENST00000595064 547 ntBASIC16.27■□□□□ 0.2
CCDC60Q8IWA6 TLDC2-203ENST00000602922 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms