Protein–RNA interactions for Protein: Q86YS3

RAB11FIP4, Rab11 family-interacting protein 4, humanhuman

Predictions only

Length 637 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11FIP4Q86YS3 AC008687.7-202ENST00000637404 953 ntBASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 C5orf66-206ENST00000624272 2479 ntTSL 2 BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 SUOX-204ENST00000394115 2394 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 IGFBP5-201ENST00000233813 6215 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 AGGF1P1-201ENST00000509500 2073 ntBASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 ZFP30-201ENST00000351218 6090 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 PIGS-203ENST00000395346 2815 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 DUOXA1-216ENST00000613425 1867 ntTSL 5 BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 GTF3C4-201ENST00000372146 9043 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 EML4-203ENST00000402711 3568 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 PHTF2-206ENST00000422959 3525 ntAPPRIS P4 TSL 5 BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 GRK6-211ENST00000528793 2571 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
RAB11FIP4Q86YS3 ZNF655-201ENST00000252713 2535 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ABLIM2-209ENST00000505872 1680 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 C12orf76-209ENST00000615315 1580 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 PDE8A-203ENST00000394553 3912 ntAPPRIS P4 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 FGFR3-203ENST00000352904 3733 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 RNF182-208ENST00000544682 3495 ntAPPRIS P1 TSL 4 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ARAP1-203ENST00000393605 4778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 SPEG-202ENST00000396686 1086 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 C8orf37-AS1-202ENST00000517655 562 ntTSL 4 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 AC090099.4-201ENST00000527671 1027 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 RNF41-210ENST00000552244 716 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 AL008721.1-201ENST00000609964 604 ntBASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ACSL1-208ENST00000507295 2490 ntTSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 COL5A1-201ENST00000371817 8471 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 DACH1-204ENST00000620444 4627 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 AL023775.1-201ENST00000454907 1746 ntBASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 CEP131-208ENST00000575907 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ERC1-219ENST00000546231 4390 ntTSL 5 BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 AC097376.2-205ENST00000610159 5334 ntBASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 ST20-AS1-201ENST00000560255 4223 ntBASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
RAB11FIP4Q86YS3 PRNP-203ENST00000430350 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 F2RL1-201ENST00000296677 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 C11orf16-201ENST00000326053 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 DDX49-214ENST00000629999 1912 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ATP2B3-204ENST00000370186 6742 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 BTN1A1-201ENST00000244513 2895 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CDH16-202ENST00000394055 2821 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 RHOH-218ENST00000613272 1865 ntAPPRIS P1 TSL 3 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 NOC2L-201ENST00000327044 2790 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 SREBF1-205ENST00000395757 3696 ntAPPRIS ALT2 TSL 2 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CEP131-203ENST00000450824 3543 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ZFY-201ENST00000155093 5239 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 TISP43-201ENST00000409793 538 ntTSL 4 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 CHMP1AP1-201ENST00000445563 662 ntBASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 HOMER2P2-201ENST00000451621 847 ntBASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 PEX5L-215ENST00000485199 2992 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC17.31■□□□□ 0.36
RAB11FIP4Q86YS3 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 76.3 ms