Protein–RNA interactions for Protein: Q6VVB1

NHLRC1, E3 ubiquitin-protein ligase NHLRC1, humanhuman

Predictions only

Length 395 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC1Q6VVB1 MLF1-201ENST00000355893 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
NHLRC1Q6VVB1 RET-202ENST00000355710 5659 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 ZNF576-201ENST00000336564 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 GAK-201ENST00000314167 4442 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 AL365205.1-204ENST00000359201 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 AGGF1P1-201ENST00000509500 2073 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 KIF6-203ENST00000394362 2394 ntTSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 CDH20-201ENST00000262717 3882 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 DEF8-210ENST00000563594 4450 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TSPAN18-207ENST00000520358 3316 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TMEM212-201ENST00000334567 1881 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PNPLA3-201ENST00000216180 2805 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 CD8B2-202ENST00000417670 633 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TTTY23B-201ENST00000442790 549 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 FTLP10-202ENST00000505798 471 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 RNA5SP486-201ENST00000515961 83 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 AC005225.4-201ENST00000557330 545 ntBASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 C17orf62-239ENST00000585080 741 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 RAMP2-202ENST00000587142 549 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 RAMP2-203ENST00000588576 573 ntTSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 GFRA1-201ENST00000355422 2583 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 LRRC41-201ENST00000343304 2947 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 KLHL13-207ENST00000540167 3396 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 POLL-205ENST00000370169 2360 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 DBN1-203ENST00000393565 2701 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 CCNJ-201ENST00000265992 4115 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 INSC-208ENST00000530161 1702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 PNMA3-202ENST00000593810 1432 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 TMPRSS2-202ENST00000398585 3240 ntTSL 2 BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 MAGED4B-202ENST00000360134 2510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
NHLRC1Q6VVB1 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 UBE4B-201ENST00000253251 4772 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 RUFY1-204ENST00000437570 2642 ntAPPRIS ALT2 TSL 2 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC020910.5-201ENST00000623668 1865 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 SPATA6-204ENST00000396199 4964 ntTSL 2 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC239800.3-201ENST00000424684 5243 ntTSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 BIRC5-203ENST00000374948 2446 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC099521.3-201ENST00000624251 2938 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 CDS2-203ENST00000460006 9298 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AL355864.2-201ENST00000447420 863 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 FTH1P14-201ENST00000482930 551 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 ALG3P1-201ENST00000508806 1114 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 LINC02279-201ENST00000553435 737 ntTSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 VPS18-202ENST00000558474 873 ntTSL 3 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 RPL28-206ENST00000558752 671 ntTSL 3 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC106820.3-201ENST00000561653 397 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 FAM66A-202ENST00000602658 546 ntTSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 CECR7-204ENST00000609932 568 ntTSL 2 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 AC244669.2-201ENST00000612320 853 ntBASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 MAOB-201ENST00000378069 2566 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 TRMT1-201ENST00000221504 2179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 ISLR-202ENST00000395118 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
NHLRC1Q6VVB1 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 70.7 ms