Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AC244197.3-201ENST00000422081 2635 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 DCUN1D3-201ENST00000324344 6162 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 GTPBP8-202ENST00000383677 1787 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 MAPRE2-201ENST00000300249 4265 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SLC39A8-203ENST00000424970 4032 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 PTPN21-201ENST00000328736 6089 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 FKBP6-202ENST00000413573 1507 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 COL5A1-208ENST00000618395 8437 ntAPPRIS ALT2 TSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 DNMT3L-201ENST00000270172 1706 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 NAALADL1-202ENST00000355721 2100 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ALOX15B-202ENST00000380183 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 EPN2-205ENST00000395626 2863 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 UPB1-201ENST00000326010 2290 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 TMEM52-201ENST00000310991 929 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ZNF593-202ENST00000374266 675 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 MFAP2-201ENST00000375534 970 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 KRTAP10-1-201ENST00000400375 1215 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 RNF183-202ENST00000416588 849 ntAPPRIS P1 TSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AL589987.1-201ENST00000453380 819 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SDHAP3-202ENST00000515467 728 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ZNF890P-202ENST00000530367 1156 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 GABARAPL2-202ENST00000563744 791 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 C19orf70-206ENST00000590389 769 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SLC9A3-AS1-206ENST00000607005 435 ntTSL 3 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 Six3os1_5.1-201ENST00000611000 271 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 MIR6069-201ENST00000620069 79 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ZNF76-202ENST00000339411 2447 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 GRIN1-204ENST00000371553 3751 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 USP2-201ENST00000260187 3732 ntAPPRIS P4 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 HMGA2-204ENST00000403681 4473 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 AL139193.2-201ENST00000553712 1954 ntTSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 CYTH1-215ENST00000591455 3286 ntAPPRIS P3 TSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 RPUSD4-201ENST00000298317 2512 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ST3GAL5-203ENST00000393805 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 TICAM1-201ENST00000248244 2676 ntAPPRIS P1 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ARHGAP4-201ENST00000350060 3235 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 LHCGR-201ENST00000294954 3044 ntAPPRIS P2 TSL 1 (best) BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 NPBWR2-201ENST00000369768 1352 ntAPPRIS P1 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 KRT8P12-202ENST00000472924 1397 ntBASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC15.49■□□□□ 0.07
FOXR1Q6PIV2 TTC14-202ENST00000382584 2274 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 GNPDA1-204ENST00000503794 2622 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 AC097376.2-205ENST00000610159 5334 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 FGD6-203ENST00000546711 4568 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 AL589702.1-201ENST00000641229 1509 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 EIF3C-201ENST00000331666 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 MIR497HG-202ENST00000572453 3838 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 FAM86B1-216ENST00000533852 2043 ntAPPRIS ALT2 TSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 METAP1D-201ENST00000315796 3419 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 CIAPIN1-207ENST00000565961 1814 ntTSL 3 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 PIK3R6-204ENST00000619866 3041 ntAPPRIS P1 TSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SLC26A6-213ENST00000455886 2460 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 AQP7-204ENST00000379506 1062 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 AC114501.2-201ENST00000439631 535 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 AC234783.1-201ENST00000441761 496 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 IL32-211ENST00000525643 1272 ntAPPRIS P4 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 IL32-213ENST00000528163 950 ntAPPRIS P4 TSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 IL32-231ENST00000551513 791 ntAPPRIS ALT2 TSL 3 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 CTBP2P3-201ENST00000585629 1255 ntBASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 PRF1-203ENST00000638674 1080 ntTSL 5 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 KDM2B-201ENST00000377069 5224 ntAPPRIS ALT2 TSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 PRKN-205ENST00000366897 2877 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 BTNL8-206ENST00000508408 1717 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SPRY1-208ENST00000622283 2352 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 SLC2A4-202ENST00000424875 1852 ntTSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 WDR5-201ENST00000358625 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.48■□□□□ 0.07
FOXR1Q6PIV2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.48■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 48.4 ms