Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 CYP2AB1P-202ENST00000454440 1456 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 LIMK1-208ENST00000538333 2170 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 RHOH-220ENST00000615083 2156 ntAPPRIS P1 TSL 4 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 LIPE-201ENST00000244289 3813 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 POLR1E-202ENST00000377798 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AL356275.1-201ENST00000638446 7440 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SMAD2-212ENST00000591214 1714 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 POM121L14P-201ENST00000406100 1558 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AC104407.1-201ENST00000511017 1568 ntTSL 3 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 CYP4F11-204ENST00000591841 2531 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 HNRNPUL1-207ENST00000595018 2794 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 TRPM4-201ENST00000252826 4109 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SWI5-205ENST00000495313 466 ntAPPRIS ALT2 TSL 3 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SMN2-210ENST00000511812 867 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 BANF1P1-201ENST00000553684 263 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 LINC00237-203ENST00000593272 630 ntTSL 4 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AF228730.6-201ENST00000641497 218 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AC084121.3-201ENST00000641716 218 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ZNF34-201ENST00000343459 1901 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ZNF34-202ENST00000429371 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 IMPDH1P4-201ENST00000445028 1534 ntBASIC13.93□□□□□ -0.18
LPCAT4Q643R3 CLCNKB-204ENST00000619181 1544 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ARHGAP45-203ENST00000543365 3750 ntAPPRIS ALT2 TSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 ITGB2-201ENST00000302347 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 AFDN-211ENST00000447894 5475 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SAP30BP-202ENST00000355423 2439 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 TUBGCP5-208ENST00000620435 3342 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 MPDU1-201ENST00000250124 1601 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 TMC5-204ENST00000541464 3581 ntTSL 2 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 RBM44-201ENST00000316997 4282 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
LPCAT4Q643R3 SLC5A9-210ENST00000533824 2219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PNPLA6-201ENST00000221249 4617 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 STAM2-201ENST00000263904 5701 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 LINC00299-202ENST00000442956 2342 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 SKA3-202ENST00000314759 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 CALD1-205ENST00000422748 2665 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 SCGN-202ENST00000377961 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 APC2-201ENST00000233607 10151 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 BCL2L1-201ENST00000307677 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PTPN1-202ENST00000541713 3469 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 DYNC1I1-201ENST00000324972 2950 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 IGHV3-23-201ENST00000390609 432 ntAPPRIS P1 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 SPDYE17-201ENST00000412399 783 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AL671277.1-201ENST00000429656 993 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 HLA-K-203ENST00000430151 1046 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AHSA2-208ENST00000489653 1197 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 SECTM1-202ENST00000580437 1030 ntAPPRIS ALT2 TSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 RN7SL510P-201ENST00000581311 263 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 KLK15-204ENST00000598239 855 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 CALM3-211ENST00000598871 561 ntTSL 4 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AC116407.3-201ENST00000623905 1129 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 DHX30-215ENST00000619982 3574 ntAPPRIS ALT1 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ZNF419-202ENST00000347466 3654 ntAPPRIS P3 TSL 2 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 PCDHB19P-202ENST00000625133 2914 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 YIPF6-204ENST00000462683 6741 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AC102953.2-201ENST00000609755 3026 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AL022323.5-201ENST00000624101 2059 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 AL645937.6-201ENST00000641122 3727 ntBASIC13.92□□□□□ -0.18
LPCAT4Q643R3 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 CTIF-202ENST00000382998 4407 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
LPCAT4Q643R3 MKRN5P-201ENST00000445263 1467 ntBASIC13.92□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms