Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 ACTBP7-201ENST00000418351 1124 ntBASIC18.15■□□□□ 0.5
RC3H1Q5TC82 AL391832.2-203ENST00000423175 554 ntTSL 3 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 RN7SL375P-201ENST00000492442 298 ntBASIC18.15■□□□□ 0.5
RC3H1Q5TC82 GDNF-207ENST00000515058 764 ntTSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 COX5A-205ENST00000568517 582 ntTSL 3 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 NT5C-204ENST00000578337 582 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 AL009176.1-201ENST00000607876 650 ntBASIC18.15■□□□□ 0.5
RC3H1Q5TC82 AC011451.3-201ENST00000634951 582 ntTSL 3 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 AC007182.1-201ENST00000455232 2159 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 CHMP1A-202ENST00000535997 2295 ntTSL 2 BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 DNMT3L-204ENST00000628202 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RC3H1Q5TC82 TEAD3-202ENST00000402886 2729 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 LRFN1-201ENST00000248668 3381 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 ABI3-201ENST00000225941 2109 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 SLC39A8-201ENST00000356736 3144 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
RC3H1Q5TC82 HPGD-209ENST00000510901 1535 ntTSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 NOMO2-211ENST00000621364 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 LRCH3-202ENST00000414675 2299 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 GPD1-205ENST00000548814 1591 ntTSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 KCNT1-206ENST00000486577 3760 ntAPPRIS ALT2 TSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 ODCP-201ENST00000459650 1639 ntBASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC055854.1-203ENST00000521141 1630 ntTSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 MED11-201ENST00000293777 833 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 UQCC2-201ENST00000374214 432 ntTSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 DIO1-203ENST00000388876 606 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 BPIFB5P-201ENST00000457066 1099 ntBASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TIMM17B-204ENST00000465150 964 ntTSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 MUSTN1-202ENST00000486659 622 ntTSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC083801.1-201ENST00000491689 358 ntBASIC18.14■□□□□ 0.49
RC3H1Q5TC82 DIO1-204ENST00000524406 626 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TMEM123-208ENST00000532161 743 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 DIO1-213ENST00000532493 406 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC009779.3-204ENST00000549424 367 ntTSL 3 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AL132801.1-201ENST00000559675 567 ntTSL 4 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 C19orf70-203ENST00000587589 577 ntTSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC004528.1-201ENST00000588380 641 ntTSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 APOC4-202ENST00000592954 615 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 AC008972.2-201ENST00000606587 494 ntBASIC18.14■□□□□ 0.49
RC3H1Q5TC82 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 CDIP1-209ENST00000567695 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 CCDC32-201ENST00000358005 1704 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 FAM104A-202ENST00000405159 2865 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 XRCC3-209ENST00000554913 2539 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 TAF9-202ENST00000328663 1461 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
RC3H1Q5TC82 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 CNPY4-201ENST00000262932 1502 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 ZNF620-202ENST00000418905 2022 ntTSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PLAC9P1-201ENST00000397540 389 ntTSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 OR52M2P-201ENST00000414298 959 ntBASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 CISD2-202ENST00000503643 808 ntTSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AC068831.5-201ENST00000557387 328 ntBASIC18.13■□□□□ 0.49
RC3H1Q5TC82 MAX-218ENST00000557746 571 ntTSL 4 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PLA2G15-209ENST00000566188 1203 ntTSL 2 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 MIR4265-201ENST00000582152 99 ntBASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 B4GALNT4-201ENST00000329962 3444 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 CBX6-202ENST00000407418 6122 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
RC3H1Q5TC82 AC018442.1-201ENST00000421439 2061 ntBASIC18.13■□□□□ 0.49
RC3H1Q5TC82 PDE8B-203ENST00000340978 3426 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms