Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AC104758.2-201ENST00000562716 483 ntTSL 3 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AL358215.2-201ENST00000639693 946 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 GPSM1-202ENST00000354753 3533 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 PITPNM3-201ENST00000262483 7086 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 NDC1-201ENST00000371429 5134 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 KCP-203ENST00000610776 5108 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 BCAR1-204ENST00000418647 3387 ntAPPRIS ALT2 TSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 ENO2-211ENST00000541477 2549 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 HCG27-201ENST00000383331 1720 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 ABCB8-201ENST00000297504 2487 ntTSL 2 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 LDHAL6B-201ENST00000307144 1693 ntAPPRIS P1 BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 NLRX1-204ENST00000409991 3716 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
HERC4Q5GLZ8 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 SIGLEC5-201ENST00000534261 2360 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 PGBD5-202ENST00000525115 1569 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 TNN-203ENST00000622870 3719 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 MGAT1-202ENST00000333055 8863 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 CACNA2D1-201ENST00000356253 3858 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 TMEM52-203ENST00000378602 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 MPV17-205ENST00000402310 906 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC104306.2-201ENST00000451877 341 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 LDHBP1-201ENST00000455730 1119 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AL358393.1-201ENST00000456771 532 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 UPF3AP2-201ENST00000457924 1132 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC131206.1-201ENST00000538078 1211 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC025810.1-201ENST00000569986 981 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 MIR4706-201ENST00000582134 82 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 ZNFX1-AS1_1.1-201ENST00000615787 198 ntBASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
HERC4Q5GLZ8 AC138028.6-201ENST00000616106 1482 ntBASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 P2RX5-207ENST00000551178 1863 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 AL365209.1-201ENST00000624418 6473 ntBASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 ZNF664-202ENST00000392404 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 AC092135.3-201ENST00000624151 1846 ntBASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 NR4A1-213ENST00000550082 2029 ntTSL 5 BASIC16.52■□□□□ 0.23
HERC4Q5GLZ8 CRCP-201ENST00000338592 1393 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 HTR3A-205ENST00000504030 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 ANKLE2-210ENST00000542657 2446 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 VIPAS39-202ENST00000343765 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 TSFM-207ENST00000540550 1935 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 E2F6-201ENST00000307236 3317 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 PRMT9-201ENST00000322396 3528 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 AC026748.1-201ENST00000624349 3251 ntBASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 LINC00665-203ENST00000438368 1863 ntTSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 FGFR1OP-201ENST00000349556 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 IGLV4-69-201ENST00000390282 419 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 VCPKMT-201ENST00000395859 795 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 CNN2P8-201ENST00000421872 913 ntBASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 LINC02158-201ENST00000432377 897 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 SPATA24-205ENST00000509959 641 ntTSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 PAFAH1B3-202ENST00000538771 1098 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 AC078819.1-201ENST00000547454 765 ntBASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 AC012085.1-201ENST00000548270 765 ntBASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 KRT90P-201ENST00000549264 1064 ntBASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 MIR22HG-212ENST00000577164 931 ntTSL 4 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 IFITM3-204ENST00000602735 713 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 ORMDL3-202ENST00000394169 2230 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 SMARCA4-207ENST00000541122 5139 ntAPPRIS P4 TSL 5 BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
HERC4Q5GLZ8 TGM6-202ENST00000381423 2158 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms