Protein–RNA interactions for Protein: Q2NKJ3

CTC1, CST complex subunit CTC1, humanhuman

Predictions only

Length 1,217 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1Q2NKJ3 MIR1227-201ENST00000408484 88 ntBASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 AC078875.1-201ENST00000431907 724 ntBASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 AL008733.1-201ENST00000440516 469 ntTSL 3 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 C12orf10-207ENST00000549488 840 ntTSL 5 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 ZSCAN10-205ENST00000572548 618 ntTSL 3 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 SPACA3-205ENST00000580599 949 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 C15orf59-AS1-202ENST00000615095 1224 ntTSL 5 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 EIF4A1-201ENST00000293831 1756 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 RPN1-207ENST00000497289 2137 ntTSL 2 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 CYP1A1-203ENST00000395049 1594 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 IER5-201ENST00000367577 4188 ntAPPRIS P1 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 SALL3-201ENST00000536229 3997 ntTSL 3 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC15.74■□□□□ 0.11
CTC1Q2NKJ3 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 TAOK3-201ENST00000392533 4384 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 UROD-201ENST00000246337 1300 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AL390038.1-201ENST00000419814 2481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AL359258.1-201ENST00000438965 2481 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 KRT8P21-201ENST00000430398 1491 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 TAF5-201ENST00000369839 3268 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 ASNA1-201ENST00000357332 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 PSMB10-201ENST00000358514 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AP000356.3-201ENST00000382243 753 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 CRYBB3-202ENST00000404334 601 ntTSL 3 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 NAGK-204ENST00000443872 878 ntTSL 3 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AC017007.3-201ENST00000479865 435 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 TPM1-223ENST00000560445 485 ntTSL 3 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 MIR3677-201ENST00000578964 60 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 BX537318.1-201ENST00000608290 1207 ntTSL 5 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 Z98259.2-201ENST00000641583 609 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 PML-215ENST00000565898 5393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 AJ011931.1-201ENST00000618749 2492 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 CAP2P1-201ENST00000557743 1390 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 UCKL1-AS1-201ENST00000623569 3602 ntBASIC15.73■□□□□ 0.11
CTC1Q2NKJ3 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 TRIP10-208ENST00000596758 1920 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 ZNF134-201ENST00000396161 4914 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 SERP1-201ENST00000239944 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 GOLGA8H-201ENST00000566740 1899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 GOLGA8J-201ENST00000567927 1899 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC123912.2-201ENST00000594927 2409 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 HFE-203ENST00000336625 804 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC116609.2-201ENST00000431542 256 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC026320.2-201ENST00000434379 478 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC008723.1-201ENST00000506922 207 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 MTND2P7-201ENST00000521337 640 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 FXYD2-205ENST00000528014 672 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 LTBR-209ENST00000541102 1084 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 ZNF124-206ENST00000543802 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC006435.2-201ENST00000574290 846 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 RPL17P45-201ENST00000586289 509 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 MEG3_2.1-201ENST00000611456 105 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 MLLT10-216ENST00000621220 381 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 AC127024.7-201ENST00000625101 200 ntBASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 CRK-202ENST00000398970 3675 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 UHRF1-204ENST00000616255 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 ACSL1-202ENST00000454703 3636 ntTSL 5 BASIC15.72■□□□□ 0.11
CTC1Q2NKJ3 ILDR1-202ENST00000344209 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms