Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 POM121-205ENST00000627934 5480 ntAPPRIS P3 TSL 5 BASIC12.5□□□□□ -0.41
SSBP1Q04837 ZKSCAN2-201ENST00000328086 7523 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 CILP2-201ENST00000291495 4199 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 ATP2C1-201ENST00000328560 3484 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 TMEM63B-202ENST00000323267 3198 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RAB40A-202ENST00000372633 3126 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
SSBP1Q04837 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 HSPA1L-201ENST00000375654 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SPOCD1-201ENST00000257100 2472 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 YWHAQ-201ENST00000238081 2208 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 APBB1-219ENST00000608704 2095 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 EMC10-201ENST00000334976 9446 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SGCE-202ENST00000415788 1871 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SYNPO-205ENST00000522122 5098 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 ACVR1B-202ENST00000415850 1665 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 NFIX-208ENST00000587260 1537 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 Z98257.2-202ENST00000641138 1548 ntBASIC12.49□□□□□ -0.41
SSBP1Q04837 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 BCL2L12-211ENST00000614495 1402 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 DNAJA4-206ENST00000446172 1399 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 MRPL55-202ENST00000336300 722 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 MRPL55-206ENST00000366732 722 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 PAXX-201ENST00000371620 812 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RAD18-204ENST00000418463 563 ntTSL 4 BASIC12.49□□□□□ -0.41
SSBP1Q04837 SPDYE7P-202ENST00000420373 878 ntBASIC12.49□□□□□ -0.41
SSBP1Q04837 RAD18-205ENST00000421052 582 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 AC092910.3-202ENST00000469070 982 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RN7SL618P-201ENST00000477850 296 ntBASIC12.49□□□□□ -0.41
SSBP1Q04837 AC022616.1-201ENST00000518688 554 ntBASIC12.49□□□□□ -0.41
SSBP1Q04837 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 KLK3-207ENST00000595952 969 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 SMIM22-211ENST00000615889 1047 ntAPPRIS P4 TSL 5 BASIC12.49□□□□□ -0.41
SSBP1Q04837 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RRN3P3-202ENST00000551766 3366 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 DPP8-202ENST00000321147 3125 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 CEP70-201ENST00000264982 2732 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 MICB-202ENST00000399150 2346 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SUPT7L-203ENST00000405491 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 UBA5-202ENST00000356232 3705 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 TP53I11-222ENST00000616990 3567 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 FOXM1-203ENST00000361953 3370 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
SSBP1Q04837 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
SSBP1Q04837 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 HMGA1-203ENST00000374116 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 DNAJC3-AS1-201ENST00000499499 2908 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 TBC1D9B-208ENST00000519746 2755 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 WNT5A-202ENST00000474267 6042 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 RCAN3-207ENST00000538532 2640 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 NAP1L2-201ENST00000373517 2550 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SSBP1Q04837 GLB1L-202ENST00000392089 2574 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 FAM219B-201ENST00000357635 3550 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 DENND3-211ENST00000519811 5482 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 DRD5P1-201ENST00000456605 1438 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 PHF8-202ENST00000338154 6062 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 SUV39H2-201ENST00000313519 3087 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 OPA1-202ENST00000361510 6492 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 ERAS-201ENST00000338270 1266 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
SSBP1Q04837 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP1Q04837 AL139094.1-201ENST00000405549 1188 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 LSM5-207ENST00000410044 687 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP1Q04837 SMARCA4-202ENST00000413806 5512 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 FAM58DP-201ENST00000428076 619 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 RBPMS2P1-201ENST00000437762 623 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 SATB1-217ENST00000493952 626 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP1Q04837 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP1Q04837 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
SSBP1Q04837 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC12.48□□□□□ -0.41
SSBP1Q04837 PXN-AS1-204ENST00000542265 854 ntTSL 2 BASIC12.48□□□□□ -0.41
SSBP1Q04837 AL137786.1-202ENST00000555496 789 ntTSL 5 BASIC12.48□□□□□ -0.41
SSBP1Q04837 AC140113.2-201ENST00000604370 208 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 AC004840.1-201ENST00000636359 365 ntBASIC12.48□□□□□ -0.41
SSBP1Q04837 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms