Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 MAGEA4-202ENST00000360243 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 MAGEA4-203ENST00000370335 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
CXCR4P61073 MAGEA4-204ENST00000370340 1773 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC13.48□□□□□ -0.25
CXCR4P61073 ARHGEF37-201ENST00000333677 4968 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
CXCR4P61073 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.47□□□□□ -0.25
CXCR4P61073 AC005865.2-203ENST00000636557 2959 ntTSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 ZNF783-202ENST00000434415 4452 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 ATXN7-201ENST00000295900 7224 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 AC009690.1-201ENST00000379915 4374 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 REV1-202ENST00000393445 4686 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 NCF2-201ENST00000367535 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 TUBB8P4-201ENST00000511806 1324 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 AL583722.1-201ENST00000540171 1307 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 ZFYVE27-202ENST00000357540 2765 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 ZFYVE27-204ENST00000370610 2769 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 TNIP3-201ENST00000057513 2416 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 CYB561D1-202ENST00000369868 1085 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 PKIG-203ENST00000372887 769 ntTSL 3 BASIC13.47□□□□□ -0.25
CXCR4P61073 C6orf52-202ENST00000379586 430 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 TAS2R41-201ENST00000408916 924 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
CXCR4P61073 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC13.47□□□□□ -0.25
CXCR4P61073 ESPNP-202ENST00000414828 571 ntTSL 3 BASIC13.47□□□□□ -0.25
CXCR4P61073 AC136604.1-202ENST00000425471 771 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 CNN2P11-201ENST00000429351 262 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 VCX3B-204ENST00000453306 868 ntAPPRIS ALT2 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 SLC52A1-203ENST00000512825 2989 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 DAD1-205ENST00000543337 501 ntTSL 3 BASIC13.47□□□□□ -0.25
CXCR4P61073 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 COLCA2-204ENST00000610738 975 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 GOLGA8IP-202ENST00000611635 2100 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 AC244153.1-203ENST00000622796 419 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 PDCD6-214ENST00000628729 1073 ntTSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 AC004461.2-201ENST00000629517 803 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 IL1RN-201ENST00000259206 1810 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 NDRG2-251ENST00000556147 2880 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 MKRN5P-201ENST00000445263 1467 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 AC024075.2-201ENST00000598112 1473 ntBASIC13.47□□□□□ -0.25
CXCR4P61073 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 RIN3-201ENST00000216487 3859 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 TRIM69-206ENST00000559390 2486 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
CXCR4P61073 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 PORCN-204ENST00000361988 1672 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
CXCR4P61073 GSDMA-201ENST00000301659 2164 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
CXCR4P61073 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 RUFY4-201ENST00000344321 2352 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 MEAF6-204ENST00000373075 2147 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 PSIP1-203ENST00000380733 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 AC022007.1-201ENST00000383808 1897 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 MARK2-206ENST00000425897 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 INHBA-203ENST00000442711 1632 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 SP6-202ENST00000536300 3848 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 MARK4-201ENST00000262891 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 TMPRSS12-202ENST00000551456 3336 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
CXCR4P61073 AFAP1-203ENST00000382543 2590 ntAPPRIS ALT1 TSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 PPP6R2-202ENST00000359139 4035 ntAPPRIS ALT2 TSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
CXCR4P61073 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 EPHB3-201ENST00000330394 4236 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 TXNDC5-204ENST00000473453 1301 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 AAMP-202ENST00000420660 1761 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 TRIM46-205ENST00000392451 3195 ntTSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 CCP110-203ENST00000396212 5549 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 KDM2B-202ENST00000377071 4595 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC13.46□□□□□ -0.25
CXCR4P61073 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.25
CXCR4P61073 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 67.6 ms