Protein–RNA interactions for Protein: P59666

DEFA3, Neutrophil defensin 3, humanhuman

Predictions only

Length 94 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEFA3P59666 SNRPF-201ENST00000266735 1389 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 PCED1B-201ENST00000432328 1862 ntAPPRIS P1 TSL 3 BASIC12.95□□□□□ -0.34
DEFA3P59666 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 AXL-203ENST00000593513 2557 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 PRR26-202ENST00000441152 2251 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 OSBP2-219ENST00000535268 3248 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 PGGHG-204ENST00000409655 2963 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 CCNC-210ENST00000520429 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 AFF2-202ENST00000342251 7313 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 EIF4E-201ENST00000280892 1097 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 KLK8-202ENST00000320838 456 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 TRAPPC3-202ENST00000373162 1056 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 AC092474.2-201ENST00000424288 719 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC12.95□□□□□ -0.34
DEFA3P59666 AL513480.1-201ENST00000451731 511 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 PFN2-205ENST00000461868 613 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 DUX4L26-201ENST00000489078 1255 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 AC104819.1-201ENST00000504587 486 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 USF1-202ENST00000368020 1717 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 RAB37-202ENST00000392610 2858 ntTSL 3 BASIC12.95□□□□□ -0.34
DEFA3P59666 BTBD3-204ENST00000405977 5137 ntAPPRIS P4 TSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 ZNF689-201ENST00000287461 3547 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 KCNJ14-202ENST00000391884 3990 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 FHAD1-205ENST00000375997 1459 ntTSL 3 BASIC12.95□□□□□ -0.34
DEFA3P59666 AL031708.1-201ENST00000454337 5326 ntAPPRIS P1 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 TMEM41A-203ENST00000421852 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 AC027369.3-201ENST00000530465 3707 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 PPP3R1-201ENST00000234310 3023 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 AL355102.3-201ENST00000554299 1678 ntBASIC12.95□□□□□ -0.34
DEFA3P59666 SIRPA-204ENST00000622179 4570 ntAPPRIS ALT1 TSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 ATP7B-202ENST00000344297 5861 ntTSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 OGFR-202ENST00000370461 4506 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 PLTP-204ENST00000420868 1420 ntTSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 EIF2AK1-201ENST00000199389 4469 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 SLC29A4-203ENST00000406453 2734 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 TINF2-215ENST00000626689 1643 ntAPPRIS ALT2 TSL 5 BASIC12.95□□□□□ -0.34
DEFA3P59666 FAM200A-202ENST00000449309 2480 ntAPPRIS P2 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 PCDHGA9-201ENST00000573521 4605 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 PAF1-204ENST00000595564 1810 ntAPPRIS ALT2 TSL 2 BASIC12.95□□□□□ -0.34
DEFA3P59666 FAM124B-201ENST00000243806 2030 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
DEFA3P59666 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 AP002008.2-201ENST00000635926 4870 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 AC110048.1-201ENST00000604293 2157 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 CCKAR-201ENST00000295589 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 ZEB2-204ENST00000409487 5361 ntAPPRIS P2 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 STRADA-243ENST00000640086 1925 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 BDH1-203ENST00000392379 3546 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 NTRK2-203ENST00000323115 3708 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 SHCBP1-201ENST00000303383 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 PDE4A-204ENST00000440014 2478 ntAPPRIS ALT2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 PPP1R27-201ENST00000330261 782 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 GUK1-210ENST00000391865 990 ntAPPRIS ALT1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 CYTH4-203ENST00000405206 636 ntTSL 4 BASIC12.94□□□□□ -0.34
DEFA3P59666 DAP-202ENST00000432074 1048 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 LRRC74B-201ENST00000442047 1179 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 AC132008.2-207ENST00000454517 770 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 TPSP2-201ENST00000561760 610 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 TMEM101-204ENST00000587529 965 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 MYRF-201ENST00000265460 5745 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 TUBA8-202ENST00000330423 2018 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC12.94□□□□□ -0.34
DEFA3P59666 TMEM53-203ENST00000372242 1846 ntTSL 3 BASIC12.94□□□□□ -0.34
DEFA3P59666 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 HS3ST5-201ENST00000312719 3901 ntAPPRIS P1 TSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 ROBO1-212ENST00000618833 7492 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 AHI1-205ENST00000457866 5549 ntAPPRIS P2 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC12.94□□□□□ -0.34
DEFA3P59666 AC008620.2-201ENST00000510294 1569 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC12.94□□□□□ -0.34
DEFA3P59666 MYADML-201ENST00000474610 2147 ntBASIC12.94□□□□□ -0.34
DEFA3P59666 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 KNDC1-202ENST00000368571 3925 ntTSL 1 (best) BASIC12.94□□□□□ -0.34
DEFA3P59666 ZNF410-201ENST00000324593 2293 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
DEFA3P59666 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 57.8 ms