Protein–RNA interactions for Protein: P55201

BRPF1, Peregrin, humanhuman

Predicted RBP Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRPF1P55201 KLF2P1-201ENST00000447438 1042 ntBASIC18.71■□□□□ 0.59
BRPF1P55201 AC004898.1-201ENST00000451057 766 ntBASIC18.71■□□□□ 0.59
BRPF1P55201 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 HYAL3-206ENST00000513170 636 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 AC025154.1-201ENST00000552806 560 ntTSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 AC005324.6-201ENST00000587972 613 ntBASIC18.71■□□□□ 0.59
BRPF1P55201 AC243964.2-201ENST00000590796 829 ntTSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 MIR6720-201ENST00000611664 98 ntBASIC18.71■□□□□ 0.59
BRPF1P55201 AP000346.4-201ENST00000614827 381 ntBASIC18.71■□□□□ 0.59
BRPF1P55201 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
BRPF1P55201 FP565260.5-201ENST00000623188 479 ntTSL 3 BASIC18.71■□□□□ 0.59
BRPF1P55201 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC18.71■□□□□ 0.59
BRPF1P55201 PDHX-201ENST00000227868 2389 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 PPP1R26-202ENST00000401470 4769 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC18.71■□□□□ 0.59
BRPF1P55201 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 ATP2A3-205ENST00000397041 4675 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC18.71■□□□□ 0.59
BRPF1P55201 C15orf61-201ENST00000342683 4253 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 CCNB1-201ENST00000256442 2169 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
BRPF1P55201 NTM-205ENST00000425719 1607 ntTSL 1 (best) BASIC18.71■□□□□ 0.58
BRPF1P55201 SYP-201ENST00000263233 2498 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.58
BRPF1P55201 GOLGA8VP-201ENST00000559009 1798 ntBASIC18.7■□□□□ 0.58
BRPF1P55201 CC2D1B-202ENST00000371586 5642 ntAPPRIS P3 TSL 5 BASIC18.7■□□□□ 0.58
BRPF1P55201 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC18.7■□□□□ 0.58
BRPF1P55201 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 RNF168-201ENST00000318037 5347 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 TRIM23-202ENST00000274327 1829 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 PDE9A-208ENST00000398225 1963 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 MBP-204ENST00000382582 2281 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 MYH14-204ENST00000440075 4247 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 IGF1-201ENST00000307046 1097 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC18.7■□□□□ 0.58
BRPF1P55201 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 ZNF248-202ENST00000374648 1286 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 IGF1-203ENST00000392904 761 ntTSL 5 BASIC18.7■□□□□ 0.58
BRPF1P55201 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 AL392046.1-202ENST00000457255 521 ntTSL 5 BASIC18.7■□□□□ 0.58
BRPF1P55201 BHMT-206ENST00000524080 1207 ntTSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 TPO-215ENST00000539820 1157 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 RPL28-208ENST00000559463 852 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 AC139099.3-201ENST00000572850 472 ntTSL 5 BASIC18.7■□□□□ 0.58
BRPF1P55201 MIR4741-201ENST00000579822 90 ntBASIC18.7■□□□□ 0.58
BRPF1P55201 CROCCP3-204ENST00000590118 574 ntTSL 4 BASIC18.7■□□□□ 0.58
BRPF1P55201 AC027601.5-201ENST00000624065 2482 ntBASIC18.7■□□□□ 0.58
BRPF1P55201 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 OS9-204ENST00000389146 2091 ntTSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC18.7■□□□□ 0.58
BRPF1P55201 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 GTF2IRD1-201ENST00000265755 3430 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC18.7■□□□□ 0.58
BRPF1P55201 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 ZBED8-202ENST00000523213 2484 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 HLA-DPA1-242ENST00000419277 1704 ntAPPRIS P2 BASIC18.69■□□□□ 0.58
BRPF1P55201 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 NCOA6-206ENST00000612493 4082 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 HARS-202ENST00000415192 1401 ntTSL 2 BASIC18.69■□□□□ 0.58
BRPF1P55201 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
BRPF1P55201 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC18.69■□□□□ 0.58
BRPF1P55201 AL136379.1-201ENST00000623471 2642 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 RDH5-201ENST00000257895 1269 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 HIST1H1B-201ENST00000331442 681 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
BRPF1P55201 RGS10-202ENST00000369103 804 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
BRPF1P55201 FNTAP2-201ENST00000430308 634 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 LINC01088-201ENST00000437737 973 ntTSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC18.69■□□□□ 0.58
BRPF1P55201 AL591846.1-201ENST00000451736 433 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 IGHVIII-5-2-201ENST00000522505 261 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 RDH5-204ENST00000548082 1259 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC18.69■□□□□ 0.58
BRPF1P55201 MIR5572-201ENST00000583188 137 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 AC020914.3-201ENST00000594712 304 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 TUBB3-215ENST00000625617 570 ntTSL 4 BASIC18.69■□□□□ 0.58
BRPF1P55201 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC18.69■□□□□ 0.58
BRPF1P55201 AC016397.2-201ENST00000624848 1985 ntBASIC18.69■□□□□ 0.58
BRPF1P55201 SETD1B-201ENST00000267197 5772 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 MAP4-202ENST00000360240 5142 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 MAGI1-216ENST00000497477 3555 ntTSL 5 BASIC18.69■□□□□ 0.58
BRPF1P55201 NOMO2-203ENST00000543392 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
BRPF1P55201 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms