Protein–RNA interactions for Protein: P55160

NCKAP1L, Nck-associated protein 1-like, humanhuman

Predictions only

Length 1,127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1LP55160 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC123786.1-201ENST00000581626 661 ntTSL 3 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 LINC00658-206ENST00000600157 901 ntTSL 5 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC097634.3-201ENST00000613067 820 ntTSL 3 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 MUC1-226ENST00000614519 1093 ntTSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 HIST1H4A-201ENST00000617569 312 ntAPPRIS P1 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 GRN-222ENST00000639447 1314 ntTSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 TNR-201ENST00000263525 5190 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 BMP4-206ENST00000559087 1708 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 ANKMY1-203ENST00000373318 2449 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 MUM1-201ENST00000415183 2837 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 AC023908.3-201ENST00000564211 3047 ntBASIC16.07■□□□□ 0.16
NCKAP1LP55160 MAP1S-201ENST00000324096 3419 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
NCKAP1LP55160 WASHC2C-208ENST00000537517 4417 ntAPPRIS ALT2 TSL 2 BASIC16.07■□□□□ 0.16
NCKAP1LP55160 ZNF365-205ENST00000395254 4173 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 WHRN-202ENST00000362057 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ITFG1-201ENST00000320640 3400 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 GPRC5C-202ENST00000392627 2988 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 SPACA9-203ENST00000372136 2536 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 SLC6A9-203ENST00000372306 1926 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ADK-205ENST00000539909 1866 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 LINC01671-201ENST00000419628 1775 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 LRIF1-202ENST00000485275 1796 ntAPPRIS ALT2 TSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 HIF3A-206ENST00000472815 1709 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 BAX-201ENST00000293288 1358 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 FAM90A7P-201ENST00000382628 1395 ntBASIC16.06■□□□□ 0.16
NCKAP1LP55160 FAM90A23P-201ENST00000400136 1395 ntBASIC16.06■□□□□ 0.16
NCKAP1LP55160 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 TSPO-201ENST00000329563 955 ntAPPRIS P1 TSL 3 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 DPM3-202ENST00000368399 517 ntBASIC16.06■□□□□ 0.16
NCKAP1LP55160 GTF2A2-205ENST00000396064 633 ntTSL 3 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 GTF2A2-208ENST00000484743 408 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 MRPL51-202ENST00000537701 601 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 TSPO-206ENST00000583777 636 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 AC068587.8-201ENST00000641239 219 ntBASIC16.06■□□□□ 0.16
NCKAP1LP55160 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 HNRNPU-201ENST00000283179 3120 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ZBED1-201ENST00000381218 2832 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 AC007388.1-204ENST00000449569 2517 ntTSL 2 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ACE-201ENST00000290863 2479 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 TRAF7-201ENST00000326181 3700 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
NCKAP1LP55160 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 CTNND2-202ENST00000458100 1962 ntTSL 5 BASIC16.06■□□□□ 0.16
NCKAP1LP55160 CDK2AP1-205ENST00000542174 1812 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SRPX-205ENST00000538295 1780 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 POLR2E-211ENST00000612655 1749 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 PRR23C-201ENST00000413199 2791 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 MIR762HG-203ENST00000570025 1429 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 MAP7D1-203ENST00000373150 3238 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC064801.2-201ENST00000625052 1303 ntBASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC108134.1-201ENST00000382225 3061 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 PRM2-201ENST00000241808 680 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SLURP2-201ENST00000317543 599 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 COX8C-201ENST00000342144 533 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 BX284668.5-201ENST00000422124 406 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 PRM2-202ENST00000435245 723 ntAPPRIS ALT2 TSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AL161932.2-201ENST00000435436 679 ntBASIC16.05■□□□□ 0.16
NCKAP1LP55160 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SCARNA21-201ENST00000517026 139 ntBASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 LINC01848-201ENST00000523446 518 ntTSL 3 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 PACS1-203ENST00000524815 628 ntTSL 4 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 JMJD8-203ENST00000562824 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC005586.2-201ENST00000563946 837 ntBASIC16.05■□□□□ 0.16
NCKAP1LP55160 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 AC004923.1-202ENST00000642106 209 ntBASIC16.05■□□□□ 0.16
NCKAP1LP55160 SYTL3-205ENST00000611299 2896 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 TBCE-202ENST00000406207 2012 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SPOCK3-226ENST00000541354 2797 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 CTBP1-AS2-205ENST00000578730 2757 ntTSL 2 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
NCKAP1LP55160 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC16.05■□□□□ 0.16
NCKAP1LP55160 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC16.05■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms