Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 AC084364.1-201ENST00000551967 1556 ntBASIC14.09□□□□□ -0.15
NR1H2P55055 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 HAGLR-202ENST00000416928 4235 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 PATL2-201ENST00000434130 1950 ntAPPRIS P3 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 KIAA0895-207ENST00000436884 1952 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 AC007240.1-201ENST00000641498 1996 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
NR1H2P55055 MTSS1-216ENST00000524090 2166 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 SLC9B2-202ENST00000394785 3126 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 KREMEN1-203ENST00000407188 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 CELF4-201ENST00000334919 3542 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MED19-201ENST00000337672 1637 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 ZNF239-203ENST00000426961 2027 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 SYCE1-202ENST00000343131 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC14.09□□□□□ -0.15
NR1H2P55055 CIB3-202ENST00000379859 467 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 RBM39-205ENST00000397370 612 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 CENPM-206ENST00000407253 818 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 AC062015.1-201ENST00000423838 1134 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 AL161785.2-201ENST00000427080 966 ntTSL 3 BASIC14.09□□□□□ -0.15
NR1H2P55055 SNRPB-202ENST00000438552 1008 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 GAPDHP21-201ENST00000450301 1010 ntBASIC14.09□□□□□ -0.15
NR1H2P55055 RAB3A-202ENST00000464076 1253 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 C3orf67-212ENST00000491845 832 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 RIC8B-209ENST00000549643 571 ntTSL 4 BASIC14.09□□□□□ -0.15
NR1H2P55055 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 AL008721.1-201ENST00000609964 604 ntBASIC14.09□□□□□ -0.15
NR1H2P55055 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 DBI-211ENST00000627093 554 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 SERF2-217ENST00000630046 862 ntTSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 MBD4-201ENST00000249910 2470 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 SF1-205ENST00000377394 2854 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 SYNE3-201ENST00000334258 3275 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 GAP43-202ENST00000393780 1901 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 CETP-203ENST00000566128 1733 ntTSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 AC131212.3-201ENST00000624087 4219 ntBASIC14.09□□□□□ -0.15
NR1H2P55055 HECTD1-219ENST00000611816 8980 ntTSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 SCML4-203ENST00000369022 2377 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 GFY-202ENST00000610896 1557 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
NR1H2P55055 COL6A1-207ENST00000612273 3251 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
NR1H2P55055 PRCP-201ENST00000313010 3090 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
NR1H2P55055 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 TMEM123-201ENST00000361236 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 COBL-205ENST00000441453 3785 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 ATP2B3-201ENST00000263519 6420 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
NR1H2P55055 GPR152-201ENST00000312457 1429 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
NR1H2P55055 SLC12A6-206ENST00000558589 3866 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 FUT3-201ENST00000303225 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 GOLM1-203ENST00000388712 3046 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 MAP7-201ENST00000354570 4152 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 INTS14-201ENST00000313182 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 SUOX-208ENST00000548274 2352 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 AC131902.2-201ENST00000566892 2172 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 OSBPL2-201ENST00000313733 4009 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 SEPT8-212ENST00000458488 1726 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 AL080243.2-201ENST00000418783 582 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 AC007274.1-201ENST00000439805 662 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 SPTLC1P1-201ENST00000447199 261 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 GNG4-205ENST00000484517 684 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 CR383656.12-201ENST00000549567 513 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
NR1H2P55055 AC012173.1-201ENST00000567942 430 ntTSL 3 BASIC14.08□□□□□ -0.16
NR1H2P55055 SPDYE22P-201ENST00000582158 798 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
NR1H2P55055 AL450472.2-201ENST00000603663 1156 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AL133215.2-201ENST00000609242 977 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AL662799.1-202ENST00000614205 422 ntBASIC14.08□□□□□ -0.16
NR1H2P55055 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 AGBL2-205ENST00000528244 2929 ntAPPRIS ALT2 TSL 2 BASIC14.08□□□□□ -0.16
NR1H2P55055 TCAM1P-207ENST00000485295 1537 ntBASIC14.08□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 41.4 ms