Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 AJ011931.1-201ENST00000618749 2492 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 TNIP1-219ENST00000524280 1716 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 FAM114A2-215ENST00000522858 3379 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 FADS1-201ENST00000350997 4525 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 SOX7-201ENST00000304501 3216 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 ODF4-201ENST00000328248 1156 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 RAB36-202ENST00000341989 936 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 CELA2B-201ENST00000375910 923 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 AC234644.1-201ENST00000406065 370 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 LSM5-207ENST00000410044 687 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHB4P54760 ISCA2P1-201ENST00000425548 448 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 AC006335.1-201ENST00000445200 547 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 FKBP11-212ENST00000552878 1052 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 AC242376.1-201ENST00000559033 726 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 SYT17-208ENST00000568433 812 ntTSL 3 BASIC16.62■□□□□ 0.25
EPHB4P54760 AC092171.5-201ENST00000608012 942 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 NDUFB5-216ENST00000611971 951 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 WT1-AS_6.1-201ENST00000614919 121 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 LINC01517-203ENST00000616194 908 ntTSL 5 BASIC16.62■□□□□ 0.25
EPHB4P54760 AC009084.3-201ENST00000623356 437 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 SHTN1-204ENST00000392903 2400 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
EPHB4P54760 AC007787.1-201ENST00000588095 1583 ntBASIC16.62■□□□□ 0.25
EPHB4P54760 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
EPHB4P54760 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
EPHB4P54760 NOS1AP-201ENST00000361897 4931 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 APAF1-203ENST00000359972 7029 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 ACIN1-203ENST00000357481 2563 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 KIAA1683-209ENST00000612316 2684 ntAPPRIS ALT2 TSL 5 BASIC16.62■□□□□ 0.25
EPHB4P54760 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
EPHB4P54760 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 AP004608.1-203ENST00000528482 3679 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC16.61■□□□□ 0.25
EPHB4P54760 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 SPOCK3-201ENST00000357154 2986 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 CELA3B-201ENST00000337107 897 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 LINC01237-201ENST00000415434 573 ntTSL 4 BASIC16.61■□□□□ 0.25
EPHB4P54760 CHID1-202ENST00000429789 1289 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 EEF1D-218ENST00000526838 926 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
EPHB4P54760 AL928654.3-201ENST00000552675 445 ntTSL 3 BASIC16.61■□□□□ 0.25
EPHB4P54760 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC16.61■□□□□ 0.25
EPHB4P54760 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 UPK3BL1-201ENST00000340457 1342 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
EPHB4P54760 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC16.61■□□□□ 0.25
EPHB4P54760 CYP51A1P3-201ENST00000400072 1428 ntBASIC16.61■□□□□ 0.25
EPHB4P54760 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
EPHB4P54760 CYP4X1-201ENST00000371901 2357 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 SPERT-204ENST00000610924 1505 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
EPHB4P54760 PHF14-215ENST00000634607 3407 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
EPHB4P54760 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 TKT-202ENST00000423516 2075 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB4P54760 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB4P54760 RCHY1-202ENST00000380840 1735 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 TRAPPC8-210ENST00000582513 3205 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 UBE3A-227ENST00000638011 8742 ntAPPRIS ALT1 TSL 5 BASIC16.6■□□□□ 0.25
EPHB4P54760 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 TMEM239-202ENST00000380585 571 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 AL136309.1-201ENST00000403917 691 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHB4P54760 RN7SL8P-201ENST00000461771 266 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 NEU3-205ENST00000531619 582 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHB4P54760 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC16.6■□□□□ 0.25
EPHB4P54760 AL160314.3-201ENST00000556041 767 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC16.6■□□□□ 0.25
EPHB4P54760 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC16.6■□□□□ 0.25
EPHB4P54760 MIR6842-201ENST00000612539 65 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 MIR6756-201ENST00000616240 63 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 AL162426.1-201ENST00000624141 743 ntBASIC16.6■□□□□ 0.25
EPHB4P54760 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
EPHB4P54760 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 54.8 ms