Protein–RNA interactions for Protein: P54753

EPHB3, Ephrin type-B receptor 3, humanhuman

Predictions only

Length 998 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3P54753 MIR33B-201ENST00000385104 96 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 AL627231.1-201ENST00000394467 1125 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 NUDT1-204ENST00000397046 712 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 LINC00313-205ENST00000427188 967 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 HCFC1-AS1-201ENST00000438219 350 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHB3P54753 RPS2P36-201ENST00000456516 831 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 RN7SL67P-201ENST00000492147 296 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 AC138230.1-201ENST00000525893 664 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 MIR4722-201ENST00000578292 60 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 NAT9-220ENST00000582870 896 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 DRG2-220ENST00000583355 891 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHB3P54753 ZNF286A-219ENST00000585194 607 ntTSL 4 BASIC15.31■□□□□ 0.04
EPHB3P54753 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 GLIDR-205ENST00000640674 884 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 LINC01215-201ENST00000607746 2592 ntTSL 3 BASIC15.31■□□□□ 0.04
EPHB3P54753 AC046158.3-201ENST00000624947 2558 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 AC006480.2-201ENST00000609770 1337 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 CYP4B1-202ENST00000371919 1494 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 POLL-204ENST00000370168 1536 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 SLC39A8-202ENST00000394833 3238 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 LINC01165-201ENST00000445190 1623 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 KHSRPP1-201ENST00000427983 1768 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 AC015909.3-201ENST00000572855 1794 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 CDK5RAP3-201ENST00000338399 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 SLC35G3-201ENST00000297307 2004 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
EPHB3P54753 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 AC018442.1-201ENST00000421439 2061 ntBASIC15.31■□□□□ 0.04
EPHB3P54753 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC15.31■□□□□ 0.04
EPHB3P54753 CLASP2-204ENST00000399362 7282 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
EPHB3P54753 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
EPHB3P54753 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 FBLN2-203ENST00000404922 4318 ntAPPRIS P4 TSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 BRD2-202ENST00000374831 4807 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 KRT82-201ENST00000257974 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 P2RX3-201ENST00000263314 1831 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 ACSS1-201ENST00000323482 3680 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 CFAP36-201ENST00000339012 1373 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 MBP-201ENST00000354542 575 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHB3P54753 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHB3P54753 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 AC026316.1-201ENST00000398900 414 ntBASIC15.3■□□□□ 0.04
EPHB3P54753 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 GAS5-209ENST00000430245 723 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 OR2R1P-201ENST00000441404 914 ntBASIC15.3■□□□□ 0.04
EPHB3P54753 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 PCCB-215ENST00000482086 1436 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHB3P54753 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHB3P54753 HAND2-AS1-202ENST00000502896 5278 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 AP001160.1-201ENST00000535817 565 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 SLIRP-210ENST00000557431 725 ntTSL 2 BASIC15.3■□□□□ 0.04
EPHB3P54753 STOML1-206ENST00000561656 1833 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 AL031282.1-201ENST00000577672 409 ntTSL 3 BASIC15.3■□□□□ 0.04
EPHB3P54753 ZIM2-AS1-201ENST00000595954 2129 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
EPHB3P54753 Metazoa_SRP.65-201ENST00000615602 264 ntBASIC15.3■□□□□ 0.04
EPHB3P54753 AC103691.2-201ENST00000618824 433 ntBASIC15.3■□□□□ 0.04
EPHB3P54753 AFF3-203ENST00000409579 4342 ntAPPRIS P3 TSL 5 BASIC15.3■□□□□ 0.04
EPHB3P54753 ZNF746-201ENST00000340622 3806 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 LILRB5-202ENST00000345866 1864 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 KCNN3-202ENST00000358505 1658 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 LINC01864-201ENST00000587218 1661 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 ZNF691-206ENST00000372508 1577 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 DEF8-219ENST00000567874 1554 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 KRT18P9-201ENST00000604826 1300 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
EPHB3P54753 CCHCR1-208ENST00000451521 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
EPHB3P54753 RPAIN-201ENST00000327154 815 ntTSL 2 BASIC15.29■□□□□ 0.04
EPHB3P54753 OR2K2-202ENST00000374428 1038 ntBASIC15.29■□□□□ 0.04
EPHB3P54753 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms