Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 TPGS2-202ENST00000383056 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 CRELD1-203ENST00000397170 1728 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 INPP5K-201ENST00000320345 2880 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC14.34□□□□□ -0.11
PDX1P52945 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC14.34□□□□□ -0.11
PDX1P52945 AC007728.2-201ENST00000563315 2296 ntTSL 5 BASIC14.34□□□□□ -0.11
PDX1P52945 AWAT1-201ENST00000374521 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 DMPK-202ENST00000343373 3227 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 PARP10-201ENST00000313028 3497 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
PDX1P52945 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC14.33□□□□□ -0.11
PDX1P52945 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
PDX1P52945 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC14.33□□□□□ -0.11
PDX1P52945 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.11
PDX1P52945 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 KRT17-201ENST00000311208 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 TMEM9-204ENST00000367334 1529 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 ARF5-201ENST00000000233 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 CABP1-203ENST00000351200 770 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 CRYBA4-201ENST00000354760 811 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.33□□□□□ -0.12
PDX1P52945 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 DMAC2-203ENST00000417807 1065 ntTSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 Z82214.1-201ENST00000419643 988 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 AL136361.1-201ENST00000435429 506 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 AL139246.4-201ENST00000442305 514 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 PUDPP3-201ENST00000445368 636 ntBASIC14.33□□□□□ -0.12
PDX1P52945 FTLP1-201ENST00000449155 526 ntBASIC14.33□□□□□ -0.12
PDX1P52945 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 AC008443.1-201ENST00000511331 1000 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 CFL1-214ENST00000534769 758 ntTSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 AP006333.2-201ENST00000544948 732 ntTSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 SNORD3B-2-202ENST00000571722 791 ntBASIC14.33□□□□□ -0.12
PDX1P52945 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 TUBB4A-212ENST00000601152 590 ntTSL 4 BASIC14.33□□□□□ -0.12
PDX1P52945 AC018635.2-201ENST00000608625 364 ntBASIC14.33□□□□□ -0.12
PDX1P52945 AP000346.4-201ENST00000614827 381 ntBASIC14.33□□□□□ -0.12
PDX1P52945 AP001043.1-205ENST00000623098 1033 ntTSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 CDK7-214ENST00000626796 358 ntTSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 CDK7-215ENST00000629350 1149 ntTSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
PDX1P52945 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 MFRP-205ENST00000619721 3917 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 ABCB8-221ENST00000498578 2350 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
PDX1P52945 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 SPON1-201ENST00000576479 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 TMEM51-204ENST00000428417 1942 ntAPPRIS P1 TSL 3 BASIC14.33□□□□□ -0.12
PDX1P52945 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 PCDHGB8P-201ENST00000502926 1973 ntBASIC14.33□□□□□ -0.12
PDX1P52945 RBM14-201ENST00000310137 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
PDX1P52945 AC013726.1-201ENST00000563747 2285 ntBASIC14.32□□□□□ -0.12
PDX1P52945 CPA5-201ENST00000393213 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 OXA1L-201ENST00000285848 1719 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 OSBP2-201ENST00000332585 4340 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 REXO1L2P-201ENST00000425429 2069 ntBASIC14.32□□□□□ -0.12
PDX1P52945 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC14.32□□□□□ -0.12
PDX1P52945 DIO3OS-208ENST00000556120 2473 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 FMNL1-206ENST00000587489 2487 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
PDX1P52945 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms