Protein–RNA interactions for Protein: P52926

HMGA2, High mobility group protein HMGI-C, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2P52926 ADM2-201ENST00000395737 535 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 LINC00659-201ENST00000412500 540 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 POM121L8P-201ENST00000417732 1281 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 TREML1-202ENST00000426005 981 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 AL161932.2-201ENST00000435436 679 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 SHBG-204ENST00000441599 973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 POM121L9P-203ENST00000441984 1285 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 PUDPP3-201ENST00000445368 636 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 KRT18P25-201ENST00000508931 1278 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 HNRNPA1P13-201ENST00000510646 963 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 KRT73-AS1-202ENST00000551089 563 ntTSL 4 BASIC13.44□□□□□ -0.26
HMGA2P52926 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 AP001063.1-201ENST00000568332 529 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC13.44□□□□□ -0.26
HMGA2P52926 AC133539.2-201ENST00000604757 467 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 FBXL7-203ENST00000510662 1758 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
HMGA2P52926 ATG9A-201ENST00000361242 3130 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 TCF7-218ENST00000520958 1408 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 TRPV4-202ENST00000418703 3247 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC13.44□□□□□ -0.26
HMGA2P52926 MEX3B-201ENST00000329713 3528 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 PYROXD2-201ENST00000370575 2028 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 WDR61-201ENST00000267973 1387 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 PRR34-201ENST00000396008 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 CICP20-201ENST00000443330 2801 ntBASIC13.44□□□□□ -0.26
HMGA2P52926 ACSM2A-209ENST00000573854 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 MOG-221ENST00000376917 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 RPN2-202ENST00000373622 2348 ntTSL 2 BASIC13.44□□□□□ -0.26
HMGA2P52926 CLEC18B-204ENST00000617101 2321 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC13.44□□□□□ -0.26
HMGA2P52926 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HMGA2P52926 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HMGA2P52926 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 ZNF135-205ENST00000511556 2253 ntAPPRIS P3 TSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 AGAP5-201ENST00000374094 2394 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 ELL-201ENST00000262809 4027 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 IDH3B-202ENST00000380851 1230 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 PEX13-202ENST00000401576 1108 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 OSM-203ENST00000403463 464 ntTSL 3 BASIC13.43□□□□□ -0.26
HMGA2P52926 CAMKMT-204ENST00000407131 652 ntTSL 3 BASIC13.43□□□□□ -0.26
HMGA2P52926 HNRNPLL-205ENST00000409636 3980 ntTSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 AC245100.3-201ENST00000441281 285 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 AC022137.2-201ENST00000503482 481 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 ATP6V0E1-203ENST00000519374 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 ST8SIA2-202ENST00000539113 1089 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 PPHLN1-221ENST00000552761 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 AC027237.1-201ENST00000560942 655 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 EPN2-210ENST00000571254 1883 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 MCRIP1-207ENST00000574190 2775 ntAPPRIS P1 TSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 CLUHP6-201ENST00000580789 941 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 KRT18P8-201ENST00000581937 1246 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 AC004637.1-201ENST00000586675 482 ntTSL 3 BASIC13.43□□□□□ -0.26
HMGA2P52926 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HMGA2P52926 AC138466.3-201ENST00000619983 221 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 LEMD3-201ENST00000308330 4764 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 FGFR1-202ENST00000335922 4157 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 SYBU-207ENST00000433638 3104 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
HMGA2P52926 RPTOR-201ENST00000306801 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 TP53I11-201ENST00000308212 3683 ntAPPRIS P1 TSL 5 BASIC13.43□□□□□ -0.26
HMGA2P52926 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 CERKL-206ENST00000410087 3208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 ST20-AS1-201ENST00000560255 4223 ntBASIC13.43□□□□□ -0.26
HMGA2P52926 TK2-221ENST00000620035 5060 ntTSL 2 BASIC13.43□□□□□ -0.26
HMGA2P52926 ACTN2-206ENST00000542672 4906 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 NFYC-215ENST00000456393 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
HMGA2P52926 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 TUNAR-201ENST00000503525 3197 ntAPPRIS P1 TSL 1 (best) BASIC13.42□□□□□ -0.26
HMGA2P52926 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.42□□□□□ -0.26
HMGA2P52926 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 DCAF8L2-203ENST00000545306 2013 ntAPPRIS P1 BASIC13.42□□□□□ -0.26
HMGA2P52926 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 SPATA20-227ENST00000634597 2587 ntAPPRIS ALT1 TSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 ADAM17-203ENST00000497134 1873 ntTSL 5 BASIC13.42□□□□□ -0.26
HMGA2P52926 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC13.42□□□□□ -0.26
HMGA2P52926 MYH11-211ENST00000576790 6272 ntTSL 1 (best) BASIC13.42□□□□□ -0.26
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms